Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0294 ATGGATTCGCCGTCGCCGGACCTAAACCTTGATAACCTGAAAGCCGTGAAAGTTCTCGGCAGAGGCGCCATGGGCACCGTCTTCCTCATCCAAGACGCCGCCAGCACTTTCGCCCTGAAGGTTGTTGACAAAACCTCCATTCATTCGAAACTTGACGCCGAACGCCGTGCCCGTTGGGAAATCCAACTCCTCTCTCAACTCTCTCACCCATTCCTTCCTTCTCTTATTTCCACCTTCGAATCTCACCATTTTCTTGCGTGGGCCCTACCTTATTGTCCAGGTGGAGATCTCAATCGTCTACGGTATCGTCAAAACGACCGCGTTTTCTCACCACCTGTTATACGTTTCTATATCGCTGAAATTATTTGCGCTCTTCAACATCTTCATTCTTTGGGTATCGCTTATCGTGATCTTAAGCCTGAGAATGTTCTTATACAAAGTTCTGGTCACGTGACTCTCACGGATTTTGATCTTTCTCGTAAGCTCGCGCCAAAAACAGTTCAAACGGTTATTTCTGATCCTCCTCCTTTGCCGCTTCCGGAAACTCACCGGAAGCATCGCCGGAGTTTTTCCCGGTGGATTCATTTTCATCCTTCCGATTTGAGTTCTCAACGGAACGGGTTGAAGAAGACTAAGTCTGCACGAGTCAGCCCGGTGAGTCGTCGGAAACCGAGTTTCTCCAATGGTGAACGGTCTAACTCGTTCGTCGGGACGGAGGAATATGTCTCGCCGGAGGTGGTTCGCGGCGACGGTCACGAGTTTGCGGTTGATTGGTGGGCTATGGGGATTCTCGCGTACGAGATGTTGTACGGTACGACGCCGTTTAAAGGGAAGAATCGGAAGGAAACGTTTCGGAATGTGTTGATGAAAACGCCGGAATTTGTTGGAAAGAGATCGGAGTTAACGGACCTGATTGAAAAGTTGTTGGAGAAGGATCCAACGAAGCGATTGGGTTACACGCGTGGCGCTATAGAGATAAAGGAGCATGAATTCTTCAAAGGTGTACAATGGGACATGTTGACGGAGATGGTGCGGCCACCGTTCATTCCGGTAAGAGACGACGGCACCGGCGAACTTACAGAACATTTATCAACCATAAATGGTGGAGTGGATATTAAGCATTACTTTGAGAGCTTGAAATCGCCGCCGTCGTTGCCGCCTTCTCCGGTGTCGTCACTGTCATGCAAGTTTAAGAAGACGTTTTCTCTTTCAGATTTCTGA 1221 0.4906 MDSPSPDLNLDNLKAVKVLGRGAMGTVFLIQDAASTFALKVVDKTSIHSKLDAERRARWEIQLLSQLSHPFLPSLISTFESHHFLAWALPYCPGGDLNRLRYRQNDRVFSPPVIRFYIAEIICALQHLHSLGIAYRDLKPENVLIQSSGHVTLTDFDLSRKLAPKTVQTVISDPPPLPLPETHRKHRRSFSRWIHFHPSDLSSQRNGLKKTKSARVSPVSRRKPSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWAMGILAYEMLYGTTPFKGKNRKETFRNVLMKTPEFVGKRSELTDLIEKLLEKDPTKRLGYTRGAIEIKEHEFFKGVQWDMLTEMVRPPFIPVRDDGTGELTEHLSTINGGVDIKHYFESLKSPPSLPPSPVSSLSCKFKKTFSLSDF* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0294 406 MobiDBLite consensus disorder prediction 201 233 - -
Lan13g0294 406 Gene3D Transferase(Phosphotransferase) domain 1 229 351 - -
Lan13g0294 406 Gene3D Transferase(Phosphotransferase) domain 1 96 170 - -
Lan13g0294 406 SMART serkin_6 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0294 406 PANTHER FLIPPASE KINASE 1-RELATED 8 381 - -
Lan13g0294 406 Gene3D Phosphorylase Kinase; domain 1 13 95 - -
Lan13g0294 406 SUPERFAMILY Protein kinase-like (PK-like) 10 382 IPR011009 -
Lan13g0294 406 ProSitePatterns Protein kinases ATP-binding region signature. 19 40 IPR017441 GO:0005524
Lan13g0294 406 ProSiteProfiles Protein kinase domain profile. 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0294 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Lan13g0294 406 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 8 381 - -
Lan13g0294 406 Pfam Protein kinase domain 15 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0294 406 Pfam Protein kinase domain 227 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0294 Lan-Chr13 1907546 1909008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0294 4 383 AGC Kinase Gene Family AT1G51170 61.519 5.51e-166 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan13g0294 Pkinase 1.5e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0266 3 1772991 1781111 Lan13g0294 13 1907546 1909008 PCT
Lan13g0294 13 1907546 1909008 Lan3g0266 3 1772991 1781111 PCT