Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0284 ATGTATCCTAAACGGTCTAGCCAAGATGGCCCTGGTTCAGGGCAGGTGCGCACAAGTGATAGGATCAGGACTCGGCCAAACATTTATGGCCGACCATTCTCATATTACAACTCCAATATTAGGCGCACCAGGAAAAGCAAGAACAAGACAAGGACAGCAGCTTCACAGATTGCAAAGATGTTGCGTCCAGGGAACCACAGAGGGCAAGATTCAAATACTAATTCTGGCTCTACCAACCTTCGTCGTTCCACCAGGAAGAGAATGATTAACAAAAACCTTGAAGATTTCACTGACAGCTCTGGACACGAGGATGATGACTTAATGAGACCCCAATATCGAACGTTAAGAAACCGGGTTAGAAATAGTGTCACCCGGGATGATTTGATGTCTACAAAGCACAAAAGAACAGTACAGACTAAACCAGAACCACGACGTGAAGGCCTACGACCTCGCCGTTCCAGGGCTGCTGCAAGAGAACAATTGATTTTAGAATCAGATGATGAGCAAGACCTTTCAGAAGACAAGGGTGAACAAGATGAATCCGAAAATGGAAATGATGTTGAAGAAAATGACGCAGATGATGGTCAAAATGAGATTGAAGGGGATGGTGAGGGTGAAGATGGTGAGGATGAAGGTGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAGCAAGATGGAAGAAGGCGCTATGATCTTCGAAATCGTGCAGATGTCCGCAGGTTTTCTATGGAGGAGGGGAAGGCTCGGCCGAGATCCCCTCGAAGAGTGTTACATCAAGGTATGGGAACCAAGGTCAGCAGGGATGTTAGGAAGGGTTCAACACGAGTTCATAAGCGTCACCGCTTAGCAAGGCCTGAAGATTCAGATGACTCTCTTCTTGTGGATGAGCTGGATCAAGGCCCTGCTATTCCATGGGGTCGAAGTGGTAGCAGATCTGGTCCTCCTTTGGCTTTTGGGGGCTTAGACATGCATGGATCAACATCTTGGGGATTAAATCTTGCTGCATCAGGTTGGGGTCATCAGGGTGATTCTTTGACTACTCTGACATCTGGGATTCAGACTGCAGGACCAAGCTCTAAGGGAGGGGCAGATATTCAACCCTTACAGGTTGATGACAGTGTCAGTTTTTCTGATATAGGCGGGCTCTCTGAATATGTTGATGCTTTAAAGGAAATGGTTTTCTTTCCATTACTATATCCAGATTTCTTTGCAAGTTATCACATTACTCCTCCTAGGGGGGTGTTATTATGTGGGCCCCCTGGTACTGGGAAAACATTAATTGCAAGAGCTTTGGCTTGTGCCGCTTCTAAAGCTGGTCAGAAGGTTAGTTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAACTACTCTTTGAAGAAGCTCAAAGAAATCAACCTTCTATTATTTTCTTTGATGAAATAGATGGACTTGCACCTGTGAGATCTAGCAAGCAGGAACAAATTCACAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCTACCAACAGGATCGATGCTATTGACGGAGCCTTACGACGCCCTGGTAGATTTGATCGTGAATTTAACTTTTCCTTGCCTGGTTGTGAGGCACGAGCTGAAATATTAGATATACATACTCGTAAGTGGATGCACCCTCCTTCAAATGATCTGAAAAAGGAACTTGCGGCTAGTTGTGTAGGGTATTGCGGTGCTGACCTAAAGGCTCTCTGTACAGAAGCTGCCATTCGTGCTTTTCGTCAAAAATATCCGCAGGTTTATACAAGTGATGACAAATTTCTCATAGATGTTGATTCAGTTAGAGTACATAAGTATCATTTTATTGAAGCAATGTCTACAATTACTCCTGCTGCACATCGGGGAGCTATTGTGCACTCTAGGCCATTGTCTCTAGTTGTTCAACCATGTCTTCAGAGGCATCTAGAGAAAGCCATGAATATTATATCCGATATTTTCCCTTCAGCTACTCTTGCATCAGAGTTGACCAAACTTTCAATGCTTTCTTATGGATCTGCAATTCCACTCGTCTATCGGCCTAGGCTTCTACTCTGCGGCGGTGAAGGTACTGGACTGGATCATCTGGGGCCTGCGGTCTTGCATGAACTGGAAAAATTTCCTGTACATTCATTAGGACTTCCTTCTCTCCTGGCGGATCCCAGTGCAAAGACACCAGAGGAGGCATTGGTGCATATATTTGGTGAAGCTAGAAGAACAACACCATCAATTCTCTATTTACCACAGTTTGATGTTTGGTGGGAAACTGCTCATGAACAGCTCAGAGCTGTTCTCCTGACTTTACTAGAAGAATTGCCATCTGACTTACCTATCCTACTTCTTGGGACATCCTCCGTTGCACTTGCTGAAGTTGAGGAAGTGCCAACTTCAATTTTCCCTCATCGATCAATATATCAAGCGATCTTGCCAACAACCGAAGATAGGACTTTGTTTTTCGATCGTATGATAGAAGCTGTTATGTCAGTCCTGCTAGAGGGAATGAGCAAGAAATCCCAGGATACAGGATGCATTCCAGAACTTCCCAAGGCACCAAAATTGGCTAGTGGTCCAAAGGTATCTGAGCTAAAAGCAAAGGTGGAGGCTGAACAACATGCACTTCGAAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATTTTGTATGACAAGCGATTTAATGCCTTCCATTATCCAGTCTCAGATGAAGATGCACCTAATTATCGCTTGATTATACAAAACCCAATGGACATGGCTACTGTGCTGCAGCATGTTGACAATGGTCACTATATTACATGTGCAGCATTCCTTCAGGACATTGATCTTATTGTTTCCAATGCTAAGGCTTACAATGGAGATGACTACAATGGCGCTAGGATTGTCAGTAGAGCTTGCGAGCTGCGTGATGCGGTGCATGGGATGCTGTCACAGATGGATCCAGCCCTGGTAGCATACTGTGATAAGATTGCTAGCCAAGGTGGTCCAGCTAATTTGCCTGATGAATTAAGGGATTCTACATTCCCTGCTACTCCCGTTGTACAGCTGGGTACTGCTACTAGAATGAGTGCTCGACTTCGCAATGTCCAACCAGATGTTAATGTGGACCGGAGTTATGAAGCATTGAAGCGGACTAAAAAGAACACTGATGTTGTACAAGCAGCAGACAAGTCACAAGAAGATTCTGTGCTGTTAAAGTCTGCAGACGAGCACCAGGCTAATAACATAGAATCTGAAAGGATTGAACCTGTGTTAGTTGATGGAAATTCACATGGAACTTGCACAAGTAGCCAATCTGATGATGGTAACCTTGAAGATGTCATAATGCAAGATGGTGAATTTTCAAGGCAAGTGGATTCTGTGAAGGAGCTTTTTGTTAAGCGTAGTGAGAATCACAACATTCCACAACTTGAAAGGCTCTACATGAGAGTTATGAAGGGCGTGTTTGAAGCCAAGGGTAAAGGAAATAGTGGTGATCTTAAGCATTCGGTGTTGGATTTTTTGTTGAAATTTGTAGAGGATGATGCAAATTTCTGA 3600 0.4419 MYPKRSSQDGPGSGQVRTSDRIRTRPNIYGRPFSYYNSNIRRTRKSKNKTRTAASQIAKMLRPGNHRGQDSNTNSGSTNLRRSTRKRMINKNLEDFTDSSGHEDDDLMRPQYRTLRNRVRNSVTRDDLMSTKHKRTVQTKPEPRREGLRPRRSRAAAREQLILESDDEQDLSEDKGEQDESENGNDVEENDADDGQNEIEGDGEGEDGEDEGDEDGDDEEGEEEQDGRRRYDLRNRADVRRFSMEEGKARPRSPRRVLHQGMGTKVSRDVRKGSTRVHKRHRLARPEDSDDSLLVDELDQGPAIPWGRSGSRSGPPLAFGGLDMHGSTSWGLNLAASGWGHQGDSLTTLTSGIQTAGPSSKGGADIQPLQVDDSVSFSDIGGLSEYVDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFSLPGCEARAEILDIHTRKWMHPPSNDLKKELAASCVGYCGADLKALCTEAAIRAFRQKYPQVYTSDDKFLIDVDSVRVHKYHFIEAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLEKAMNIISDIFPSATLASELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLADPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLEELPSDLPILLLGTSSVALAEVEEVPTSIFPHRSIYQAILPTTEDRTLFFDRMIEAVMSVLLEGMSKKSQDTGCIPELPKAPKLASGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVSDEDAPNYRLIIQNPMDMATVLQHVDNGHYITCAAFLQDIDLIVSNAKAYNGDDYNGARIVSRACELRDAVHGMLSQMDPALVAYCDKIASQGGPANLPDELRDSTFPATPVVQLGTATRMSARLRNVQPDVNVDRSYEALKRTKKNTDVVQAADKSQEDSVLLKSADEHQANNIESERIEPVLVDGNSHGTCTSSQSDDGNLEDVIMQDGEFSRQVDSVKELFVKRSENHNIPQLERLYMRVMKGVFEAKGKGNSGDLKHSVLDFLLKFVEDDANF* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0284 1199 Gene3D - 551 636 - -
Lan13g0284 1199 SMART AAA_5 411 552 IPR003593 -
Lan13g0284 1199 MobiDBLite consensus disorder prediction 66 83 - -
Lan13g0284 1199 CDD Bromo_AAA 895 1005 - -
Lan13g0284 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 699 848 IPR027417 -
Lan13g0284 1199 Pfam Bromodomain 908 976 IPR001487 GO:0005515
Lan13g0284 1199 PANTHER BNAC08G44480D PROTEIN 1 1194 - -
Lan13g0284 1199 Pfam ATPase family associated with various cellular activities (AAA) 415 549 IPR003959 GO:0005524|GO:0016887
Lan13g0284 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 635 IPR027417 -
Lan13g0284 1199 SUPERFAMILY Bromodomain 893 1007 IPR036427 GO:0005515
Lan13g0284 1199 MobiDBLite consensus disorder prediction 87 165 - -
Lan13g0284 1199 ProSitePatterns AAA-protein family signature. 520 538 IPR003960 GO:0005524|GO:0016887
Lan13g0284 1199 CDD AAA 411 550 - -
Lan13g0284 1199 Pfam AAA+ lid domain 577 614 IPR041569 -
Lan13g0284 1199 ProSiteProfiles Bromodomain profile. 918 980 IPR001487 GO:0005515
Lan13g0284 1199 PANTHER AAA DOMAIN-CONTAINING 1 1194 IPR045199 -
Lan13g0284 1199 MobiDBLite consensus disorder prediction 1 22 - -
Lan13g0284 1199 Gene3D - 373 643 IPR027417 -
Lan13g0284 1199 MobiDBLite consensus disorder prediction 223 253 - -
Lan13g0284 1199 MobiDBLite consensus disorder prediction 166 222 - -
Lan13g0284 1199 PRINTS Bromodomain signature 927 943 IPR001487 GO:0005515
Lan13g0284 1199 PRINTS Bromodomain signature 943 961 IPR001487 GO:0005515
Lan13g0284 1199 PRINTS Bromodomain signature 961 980 IPR001487 GO:0005515
Lan13g0284 1199 SMART bromo_6 895 1002 IPR001487 GO:0005515
Lan13g0284 1199 Gene3D - 887 1015 IPR036427 GO:0005515
Lan13g0284 1199 MobiDBLite consensus disorder prediction 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0284 Lan-Chr13 1821208 1829538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0284 361 615 Calmodulin-binding Proteins AT3G56690 37.452 1.76e-42 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0284 K22531 - gmx:100787765 1965.27