Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0241 ATGACGGCCTCCAGCGGCGGCCATCTACCGGAGATGGCAAACAAAACCTCATTTCTCGGCTTCAAACTCTCTATCTTAATACTCATAGTGTTCTCTATAGCAGTGATAATTCTACTACTCCTCATCTTCCTCTGCTTTCGCCGAATGCTACTCAAGAAGAATCACAGCTCCGGCACAATCCCTCTGGTCTCCGTCGAGATCAACGACGTTAAGCACAAACCAACGGATCTTATTGAACAAAAGCAACTCGTTGAGATCGAAGACGTTGAGCCAAAGAAGAACGAGATATCGGAGATAAAGGTTGAGATGGAGAAGAAGAGTGAGGGAGAGAGTAGTGACGTGTCATGTGGGGGACAAAGTGAAACGTCGTCGTTGTCGGTGGAGGATCCGAATATAGGGTGGGGGAAGTGGTATAGTATGAAGGAAGTGGAATTTGCAACGCGTGGGTTTGCACAAGAGAATGTGATTGGTGAAGGAGGTTATGGAATTGTGTATAGAGGAGTTCTGCAAGATAATCATGTTGTCGCTGTTAAGAATCTTCTTAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGGAAAGTTAGGCACAAGAATTTGGTTCGCTTAGTAGGATATTGTGCAGAAGGTGTTAAAAGGATGCTTGTTTATGAATATGTTGACAATGGAAATTTGGAGCAGTGGCTACATGGCGATGTAGGATCAATCAGCCCCTTGACTTGGGACATTCGAATGAGGATTGCCGTTAGCACTGCAAAAGGGCTAGCCTATTTGCACGAAGGTCTAGAACCCAAAGTTGTGCACCGAGATATAAAATCCAGCAACATTCTTTTAGACAAAAAATGGAATGCCAAGGTATCTGATTTTGGGCTTGCCAAGCTCTTAGGATCTGAGAAAACCCACGTGACTACGCGTGTAATGGGAACATTTGGATATGTTTCACCTGAGTATGCAAGTACAGGTATGCTTAATGAGCGCAGTGATGTATATAGCTTTGGAGTTCTACTTATGGAGATAATTACAGGAAGAAACCCTATTGATTATTCTAAACCACCCGGAGAGATGAATTTAGTTGATTGGTTTAAGGGAATGGTTGCAAGTCGTCGTGGTGATGAGCTAGTTGATCCTTTAATCGAGGTCCAACCCTCTCCAAGATCTCTGAAGCGAGCTTTACTGGTTTGTCTGCGCTGTGTAGATTTGGATGTTATTAAGCGACCAAAGATGGGACAAATTGTCCATATGCTTGAAGCAGATGATTTTCCCTTTCGTTCTGATCTTCGAACAATGAGAGAAAAAGATCCGGTGCCTTCTCATGCAAATATTTACAGTAAAGATCCATATCCATCAAAGCATGCAGAACCTGCAGAAATATCAAAATGGAGATGA 1404 0.433 MTASSGGHLPEMANKTSFLGFKLSILILIVFSIAVIILLLLIFLCFRRMLLKKNHSSGTIPLVSVEINDVKHKPTDLIEQKQLVEIEDVEPKKNEISEIKVEMEKKSEGESSDVSCGGQSETSSLSVEDPNIGWGKWYSMKEVEFATRGFAQENVIGEGGYGIVYRGVLQDNHVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGVKRMLVYEYVDNGNLEQWLHGDVGSISPLTWDIRMRIAVSTAKGLAYLHEGLEPKVVHRDIKSSNILLDKKWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRNPIDYSKPPGEMNLVDWFKGMVASRRGDELVDPLIEVQPSPRSLKRALLVCLRCVDLDVIKRPKMGQIVHMLEADDFPFRSDLRTMREKDPVPSHANIYSKDPYPSKHAEPAEISKWR* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0241 467 MobiDBLite consensus disorder prediction 112 126 - -
Lan13g0241 467 ProSitePatterns Protein kinases ATP-binding region signature. 156 178 IPR017441 GO:0005524
Lan13g0241 467 Pfam Protein kinase domain 151 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0241 467 PANTHER OS01G0323000 PROTEIN 14 467 - -
Lan13g0241 467 ProSiteProfiles Protein kinase domain profile. 150 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0241 467 PANTHER RECEPTOR-LIKE KINASE 14 467 - -
Lan13g0241 467 Gene3D Transferase(Phosphotransferase) domain 1 226 432 - -
Lan13g0241 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lan13g0241 467 CDD STKc_IRAK 156 422 - -
Lan13g0241 467 SUPERFAMILY Protein kinase-like (PK-like) 126 422 IPR011009 -
Lan13g0241 467 Gene3D Phosphorylase Kinase; domain 1 118 225 - -
Lan13g0241 467 SMART serkin_6 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0241 467 MobiDBLite consensus disorder prediction 439 467 - -
Lan13g0241 467 MobiDBLite consensus disorder prediction 102 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0241 Lan-Chr13 1493305 1496683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0241 4 424 Trihelix Transcription Factor Family AT1G70460 41.725 1.27e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan13g0241 Pkinase 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0241 - - lang:109351508 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0241 13 1493305 1496683 Lan13g0241 13 1493305 1496683 ECH
Lan7g0155 7 943605 947127 Lan13g0241 13 1493305 1496683 LSH