Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0223 ATGGCACCTAAGAAAGAAAAGGCTCCTCCACCTTCTTCCAAGCCAGCAAAATCTGGTGGTGGAAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACATGGTTCTGTTTGATCAGGCTTCTTATGACAAGCTTCTTTCTGAAGCACCCAAGTTCAAGCTCATCACTCCTTCCATCCTTTCTGATCGTTTGAGGGTTAATGGATCTCTTGCAAGGAAGGCCATCAGAGACTTGATGGCTAGAGGTTCAATCAGGTTGGTTTCTGCCCACTCAAGTCAGCAGATATACACTAGGGCTACAAATACCTAG 327 0.4526 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLITPSILSDRLRVNGSLARKAIRDLMARGSIRLVSAHSSQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0223 108 Gene3D - 21 108 - -
Lan13g0223 108 MobiDBLite consensus disorder prediction 1 36 - -
Lan13g0223 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Lan13g0223 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Lan13g0223 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0223 Lan-Chr13 1393817 1395732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0223 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 90.654 1.67e-54 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0223 K02975 - fve:101295574 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0142 7 860073 861712 Lan13g0223 13 1393817 1395732 LSH
Lan8g1797 8 24526408 24528299 Lan13g0223 13 1393817 1395732 LSH