Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0212 ATGAGTATTCGTAGTGAATGTTATATCCTATTTTGTGTTATCCTCATTTGGTTAACTGCATGTTCTTCATCATTTAGTGACATGGATGCACTTCTGAAGGTGAAGGAATCCATGAAGGGAAGAGAAAGCAAAGGTGATGCACTTCAAGACTGGAAGTATTCCATCTCTATTTCTGCACACTGTTCATTCTCAGGTGTTAAATGTGATCAAAATTTCAGAGTCATTTCACTCAATATATCATTCATTCCTCTCTATGGTTCTATTCCTTCAGAGATTGGACTTTTGGACAAGCTTGTGAATCTCACCATCTCTCAGGATAATCTCACTGGTGAACTACCCATGGAGCTTGCTAACCTCACTTCACTTAGACTCCTCAATATTTCTCACAACGTCTTCTTTGGTCACTTTCCTGATGAAATTTCTCTCTCAATGTCTAAACTTGAGGTCCTTGATGCTTATGATAACAATTTTACAGGCCCTATACCTGAGGAAATAGTTAAATTGAAGAAACTCAAGTTTCTTCACCTGGGTGGTAACTATTTCTCAGGGAAGATACCAGAGAGTTACTCGGAGTTTCAGAGCTTGGAGTATTTAAGCTTAACTGCGAACTCCTTAACTGGTAAGATACCAAAGAGTTTGGGTATGTTGAAGACGCTGAAAGAGCTTTATTTAGGTTATAACAATGCATATGAAGGAGGAATCCCTGAAGAGCTTGGTTTCATTCAATATTTGCAGCTTCTTGATTTAGCTAGCTGCAATTTGAGCGGTGAGATTCCATCAAGTTTGGGAGCGTTGACGAATTTACACACTTTGTTCTTACAAATGAACAATCTCAGAGGTACTATTCCGCTGGAGCTCTCTTCCATGACCAGCCTCATGTCGCTGGATCTCTCCATCAATGACCTCACCGGAGAGATACCAGAGGCTTTCTCTCAGCTCAAAAACCTCACTCTTATAAGTTTCTTCCAGAACAAGCTTAGCGGCTCAATTCCTGAATTCGTTGGAGAACTTCCAAATCTTGAAACGTTTCAGATTTGGGACAACAATTTCTCTTATGTGCTTCCCTCAAACCTTGGTCAGAATGGGAAGTTTAAGTACTTTGATGTCACGAGAAACCAACTCACCGGTTTGATTCCGAAGGATTTGTGTAAAGGAGGAAAGCTTAAAACATTTATCTTCACTGATAACTTCTTCCATGGTCCAATTCCAGATGAAATTGGTAACTGCAAATCTCTCTTCAAGATTCGAGTTTCCAATAACTTCCTCAACGGACCGGTTCCTGCAGGGATCTTCAAACTACCTTATGTCAACATCATGGAGTTCGGCAATAACCGTTTTAACGGTGAACTACCTTCCGAGATTTATGGCGATTCTCTCTGGATCCTCACGCTCTCCAACAACTTGTTCACTGGGAAAATTCCTCCAACGTTGAAGAACCTCAAAAGCTTGCAGACTCTATCACTGGACGCGAATCAGTTCGTTGGTGAAATCCCAGGGGAAGTGTTTGAATTACCAGTGTTGACGAAGATCAACGTGAGTGGCAACAACCTCACCGGACCAATCCCAATGGCAATGACTCGTTGTGTTTCGTTAACTGCCGTTGATCTTAGCCGGAACATGCTGGTTGGAGAGGTTCCAAAAGGGATTAAGAATCTTATAGACTTAAGCATTTTGAATCTATCAGTAAATGATATCTCAGGTCCAATTCCCGATGAAATTCGATTCATGACGAGTCTCACAACCCTAGATCTCTCCAACAACAACTTCATAGGTAGAATCCCCTCTGGTGGTCAGTTTCTGGCCTTCGACAACAGTTCATTTTATGGAAACCCTAACCTATGTTCTTCTAATCAACCCTCTTGCACTTCCTTGGTGTATCAAAACGACAACGTTCATAAAAGCCATAGTTCAAAATCAACTAAGAACGTTATTATTGTGATTACACTTGCCACAACGGTGTTACTTGTTCTCGTAACATTATACATGATGAGGAAGAGAAAGATTCAAAATTCAATGTCGTGGAAGTTAACGGCGTTTCAGAAGCTTGACTTTGAAGCTGAAGAGGTAGTGGAATGCTTGAAGGAAGAGAACATAATAGGGAAAGGAGGAGCAGGGATCGTGTACCGCGGCTCCATAGCAAACGGAACTGACGTAGCAATAAAGCGTTTGGTGAGTCAAGGAAGTGGAAGAAACGATTATGGATTCAAAGCGGAGATTGAAACACTTGGGAAGATAAGGCATAGGAACATACTGAAACTTCTAGGGTATGTCTCCAATAAGGACACAAATTTGTTATTGTATGAATACATGGCTAATGGGAGCTTGGAGGAGTGGCTGCATGGTTCAAAAGGAGGGCATTTGACGTGGGAAATGAGGTATAAGATTGCGGTTGAAGCAGCTAAGGGATTGTGTTATTTGCACCATGATTGTTCACCTCTCATTATTCATAGAGATGTTAAATCCAATAATATATTGTTGGATGGAGATTTTGAGGCACATGTTGCTGATTTTGGACTTGCCAAGTTTTTGCATGATCATGGAGCTTCTCAGTCCATGTCCTTTATCGTTGGCTCCTATGGCTACATTGCTCCTGAGTATGGTTACACACAGCACGTAGATGAGAAAAGCGATGTGTATAGCTTCGGCATAGTGCTGTTGGAGCTGATAATAGGAAGAAAGCCAGTGGGTGAATTTGGAGATGGAATAGACATCGTTGGATGGATCAAGAAAACCACATCAAAACTCTCTCAACCGTCAGATACAGCATCAGTGTTAGCAGTGGTGGACCCAAGGATCATTCATTACCCTTTGACAAGTGTAATACATATGTTCAACATAGCTATGATGTGTGTTAAAGAAATTGGACCCACCAGGCCTACAATGAGAGAAGTTGTTCATATGCTCACAAATCCTCCACACTCTATTGCTCACAATCTAATAAATCTGTAG 2949 0.412 MSIRSECYILFCVILIWLTACSSSFSDMDALLKVKESMKGRESKGDALQDWKYSISISAHCSFSGVKCDQNFRVISLNISFIPLYGSIPSEIGLLDKLVNLTISQDNLTGELPMELANLTSLRLLNISHNVFFGHFPDEISLSMSKLEVLDAYDNNFTGPIPEEIVKLKKLKFLHLGGNYFSGKIPESYSEFQSLEYLSLTANSLTGKIPKSLGMLKTLKELYLGYNNAYEGGIPEELGFIQYLQLLDLASCNLSGEIPSSLGALTNLHTLFLQMNNLRGTIPLELSSMTSLMSLDLSINDLTGEIPEAFSQLKNLTLISFFQNKLSGSIPEFVGELPNLETFQIWDNNFSYVLPSNLGQNGKFKYFDVTRNQLTGLIPKDLCKGGKLKTFIFTDNFFHGPIPDEIGNCKSLFKIRVSNNFLNGPVPAGIFKLPYVNIMEFGNNRFNGELPSEIYGDSLWILTLSNNLFTGKIPPTLKNLKSLQTLSLDANQFVGEIPGEVFELPVLTKINVSGNNLTGPIPMAMTRCVSLTAVDLSRNMLVGEVPKGIKNLIDLSILNLSVNDISGPIPDEIRFMTSLTTLDLSNNNFIGRIPSGGQFLAFDNSSFYGNPNLCSSNQPSCTSLVYQNDNVHKSHSSKSTKNVIIVITLATTVLLVLVTLYMMRKRKIQNSMSWKLTAFQKLDFEAEEVVECLKEENIIGKGGAGIVYRGSIANGTDVAIKRLVSQGSGRNDYGFKAEIETLGKIRHRNILKLLGYVSNKDTNLLLYEYMANGSLEEWLHGSKGGHLTWEMRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDGDFEAHVADFGLAKFLHDHGASQSMSFIVGSYGYIAPEYGYTQHVDEKSDVYSFGIVLLELIIGRKPVGEFGDGIDIVGWIKKTTSKLSQPSDTASVLAVVDPRIIHYPLTSVIHMFNIAMMCVKEIGPTRPTMREVVHMLTNPPHSIAHNLINL* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0212 982 Gene3D Transferase(Phosphotransferase) domain 1 770 978 - -
Lan13g0212 982 Gene3D Ribonuclease Inhibitor 147 231 IPR032675 -
Lan13g0212 982 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 7 975 - -
Lan13g0212 982 Pfam Leucine rich repeat N-terminal domain 26 69 IPR013210 -
Lan13g0212 982 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lan13g0212 982 SUPERFAMILY RNI-like 76 399 - -
Lan13g0212 982 Gene3D Phosphorylase Kinase; domain 1 658 769 - -
Lan13g0212 982 Pfam Leucine Rich repeat 577 591 IPR001611 GO:0005515
Lan13g0212 982 SMART serkin_6 693 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0212 982 Pfam Leucine rich repeat 482 541 IPR001611 GO:0005515
Lan13g0212 982 Gene3D Ribonuclease Inhibitor 334 628 IPR032675 -
Lan13g0212 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Lan13g0212 982 Gene3D Ribonuclease Inhibitor 232 333 IPR032675 -
Lan13g0212 982 SMART LRR_typ_2 265 289 IPR003591 -
Lan13g0212 982 SMART LRR_typ_2 576 599 IPR003591 -
Lan13g0212 982 SMART LRR_typ_2 337 361 IPR003591 -
Lan13g0212 982 SMART LRR_typ_2 119 143 IPR003591 -
Lan13g0212 982 SMART LRR_typ_2 480 504 IPR003591 -
Lan13g0212 982 SUPERFAMILY RNI-like 345 598 - -
Lan13g0212 982 Pfam Protein tyrosine and serine/threonine kinase 694 967 IPR001245 GO:0004672|GO:0006468
Lan13g0212 982 Gene3D Ribonuclease Inhibitor 25 146 IPR032675 -
Lan13g0212 982 PANTHER UNNAMED PRODUCT 7 975 - -
Lan13g0212 982 ProSiteProfiles Protein kinase domain profile. 693 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0212 982 SUPERFAMILY Protein kinase-like (PK-like) 675 968 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0212 Lan-Chr13 1334185 1337857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0212 24 980 Receptor kinase-like Gene Family AT1G75820 61.691 0.0 1201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan13g0212 PK_Tyr_Ser-Thr 3.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0212 K00924 - gmx:732625 1457.97