Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0211 ATGTCAGGTTTAGAGGAGTTCAAGTTTCCACCTTCAATGAGTTCCATGGCAGTATTCAGCTGCGTTCGAGTGCAATCTATGGATGATACGGTAAATGAAATTGCATATCAAACATCCATTAACATTGAAGGACATGTATTTAGTGGTCTTCTTTATGATCAAGGCCCTGATCAACAAAGCTTCAATGATGCTAGAGGACAAAGATCTTCAAACTCTCTTCATCAGCAACATAATAATCTCAATCTTGTTAGTGCTGAAATCCAAGATGGTGCAACTATGGCTCAACCATCATCAGCAGCAGCCACTGCTTATCATCACCCTTTTTTTCCTCCATCTAATGTGTTTCCCTCTTCAATTTCCTTCAGGCCTGGTATGCCATGA 381 0.4042 MSGLEEFKFPPSMSSMAVFSCVRVQSMDDTVNEIAYQTSINIEGHVFSGLLYDQGPDQQSFNDARGQRSSNSLHQQHNNLNLVSAEIQDGATMAQPSSAAATAYHHPFFPPSNVFPSSISFRPGMP* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0211 126 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 5 111 IPR007818 GO:0003700|GO:0006355
Lan13g0211 126 PANTHER BNAC01G23660D PROTEIN 5 111 - -
Lan13g0211 126 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 8 56 IPR006511 -
Lan13g0211 126 Pfam Domain of unknown function (DUF702) 8 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0211 Lan-Chr13 1323085 1323570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0211 2 60 C2H2 Transcription Factor Family AT5G66350 61.017 2.28e-19 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lan13g0211 DUF702 1.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0211 - - lang:109325103 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0211 13 1323085 1323570 Lan13g0211 13 1323085 1323570 ECH
Lan14g0938 14 15800717 15802848 Lan13g0211 13 1323085 1323570 ECH