Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0195 ATGTCGCTGTCAACCGGAAACAGCAGCAAAATCCGACGCATTGTACGACTCCGGCAAATGCTATTCCGGTGGCGAAACAAAGCGCGCGTGACCGCCACGCGAGCACCATCGGAAGTTCCCGCAGGTTATATAGCAGTGTGTGTGGGCCCTACCATGAGAAGGTTTATCATACGCGCCACCTACTTGAACCACCCTATATTTGTAAAGCTATTGGAAGAAGTTGAAGAGGAATATGGTTTTTGTAACAATGGCCCACTCGCTATACCATGCGATGAGGAATATTTCAGAGAACTACTTCGTGTTATGGCGCAACCCAAATGTTTCAACACTATTGAAGATTTCCGTAATAGAGAATCTTGGCCGTTGCTTCGAGAAGAGCTTATCTATTGA 390 0.4667 MSLSTGNSSKIRRIVRLRQMLFRWRNKARVTATRAPSEVPAGYIAVCVGPTMRRFIIRATYLNHPIFVKLLEEVEEEYGFCNNGPLAIPCDEEYFRELLRVMAQPKCFNTIEDFRNRESWPLLREELIY* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0195 129 PANTHER SMALL AUXIN-UP RNA-RELATED 6 113 - -
Lan13g0195 129 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
Lan13g0195 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0195 Lan-Chr13 1219466 1220376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0195 6 123 Calmodulin-binding Proteins AT4G34750 42.857 4.88e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0195 K14488 - gmx:100795345 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0195 13 1219466 1220376 Lan13g0195 13 1219466 1220376 ECH
Lan7g0120 7 707527 708393 Lan13g0195 13 1219466 1220376 LSH