Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0191 ATGGGTTTCCGTTTACCTGCAATTCGAAGGGCATCATTCACTGCCAGCCAAGCATCTTCAAAAGGTGCAGCAGTCTCGAAGGGGTATCTTGCAGTATATGTTGGAGAGAAACAGAAGCGGTTTGTGATCCCAATATCATACCTGAACCAACCTTCATTCCAAGACTTGTTGAGCCAAGCGGAGGAAGAGTTTGGATATGATCATCCAATGGGTGGTCTTTCAATTCCTTGCAATGAAGAAGTCTTCCAAAATATAACTTCTTGCTTGAATGGCTTGTAA 279 0.4337 MGFRLPAIRRASFTASQASSKGAAVSKGYLAVYVGEKQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLSIPCNEEVFQNITSCLNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0191 92 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
Lan13g0191 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Lan13g0191 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0191 Lan-Chr13 1200596 1201291 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0191 14 91 Calmodulin-binding Proteins AT3G43120 44.872 2.33e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0191 K14488 - gmx:100816803 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0191 13 1200596 1201291 Lan13g0191 13 1200596 1201291 ECH