Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0189 ATGATAGCAATTCAAACCCAAGTCTTCAAATCATCCATTGAAGATTTTCTCTTTTCTCATAACTTAATACATCATTATCTACTTTTCTCCATCATGAAGACTGGTAACATGATAGCTCATGCCACACAGAAACTTCAGAGAACACTTTCACAAAGAATCAGAATGGCTTCAGCCATTGCTGGTGTTCCAAAAGGACACTTGGCAGTGTATGTTGGAGAGAACCATAAGAGGTTTGTGATTCCAATATCTTACTTGAGTTACCCCTTGTTCAAGGATTTGTTGGACTGGGCTGAAGAAGAATTTGGATTCAATCATCCAATGGGTGGTCTCACAATTCCATGTAGTGAAGATTACTTCATTAGTCTAACTTCTTCTCTTCATTAA 384 0.375 MIAIQTQVFKSSIEDFLFSHNLIHHYLLFSIMKTGNMIAHATQKLQRTLSQRIRMASAIAGVPKGHLAVYVGENHKRFVIPISYLSYPLFKDLLDWAEEEFGFNHPMGGLTIPCSEDYFISLTSSLH* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0189 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 37 126 - -
Lan13g0189 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 126 IPR003676 GO:0009733
Lan13g0189 127 Pfam Auxin responsive protein 51 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0189 Lan-Chr13 1169490 1170021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0189 62 119 Calmodulin-binding Proteins AT5G20810 63.793 1.66e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0189 K14488 - gmx:100781277 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0189 13 1169490 1170021 Lan13g0189 13 1169490 1170021 ECH