Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0183 ATGACACTTGATAGGAGATTTGTTTTGGTGGGGATTAGAATTGATAGTTATAGCAGACATCTTCTAAACTGGGCTCTTTTCAAAGTTGCTGAACCTGGTGACTATGTTATTGCTGTTCATGTAGTTAAAAATCAAAATTATGTTCCCAAAAACAAGGCCCTTATAGCTGGCTATTTAGAGGTTTATGAAGGCCTATGTGATGTTAAGAAGGTAGGTCTCATTGGTCAAGTCTTCACAGGAAGCTCTTTTAGAAGCATTCTTGTTAGAGAAGCAAAGAATCATGCTGCTATGGCTCTAGTGGTAGGGGGTAGAACTTCCACAGCCAAATATTGCTCCAAAAGACTGCCACCAAACACTAATGTTCTGGCCATCCAAGATTCAAGAATTGTCTTCAGGAGGTGCACCAATAACCAATTACCAGGTGGTCTTATGCTGGATCCAAGACCAAGTTTAACAAGCATAGGAAACCTCAGAGATAGAGTAATCCAGTCTGAATCAGGTGACTCTGAGGTGGAGAGTGAGAAATCAACAAGCCAAAATACCATTGAATTGAAGGAGGAAGCATCTAACCGATTAGAGAGGCGAAAACTAAGGTCATCATCTATGTTTTCAGGTGATCCTTCTGACCAGAAGCTTGGTTGGCCTCTGCTCCGAAGAGCCAACTCGGAAATATCTTCAACTCATCATCATGCAAGGGACATGTCAGTAGTGCAATGGGTTATGAGCTTACCAGATCGGTCACCAAAGAAAAGTCTTCACTCATGTTCTTCCATTGAGGAAAATCCATCAGAAAGAGGCATCAGTGACATGGATGATGAGAGTTTTAAAACTTATGCACCTACATATTTTGTTGAAATACCAAAAGGACTAGAGGGAAAGTTAACTTTAAACTCACTCAATTGCAAGTGGTTCAACCTTGAGGTTCTTAAGTCCTGCACTAACCACTTCTCTTCAGAAAACTTGATTGGGAAAGGAGGTAGCAATCGCGTGTACAAAGGAGTTCTCTCTGATGGGAAGCTAATAGCAGTAAAAGTTTTGAAGTCAACAAAAGAAGCCTTGAAAGATTTTGCCATTGAGGTGGAAATAATATCCTCATTGAAGCACAAAAACATCACTTCTCTACTTGGTATTTGCATTGAGGACAATGCTTTAATATCTGTTTATGATTATTTCCCTAAAGGCAGCTTAGAGAAAAATCTACATGGAAAGAAGAACAAGGATGAATCCATCATGTCATGGGAAGTGAGATTTAATATAGCTGTTAGGATTGCTGAAGCACTGGATTACCTACACATGGAAACTTTGAAGCCTGTTATACATAGAGATATCAAGTCTTCAAACATTCTTCTTTCGCATGAGTTTGAGCCACAATTATCTGATTTCGGACTCGCACTATGGGGACCAACAACTTCATCCTTTCTAACACAAGAAGATGTTGTAGGAACTTTTGGTTATATTGCTCCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTCTATGCCTTTGGTGTGGTGCTGCTTGAACTAATATCAGGAAGAGAACCAATCAGTTCAGAACCTTGCAAGGGACAGGAAAACTTGGTCATGTGGGCAAAGCCAATAATGGAGAGTGGTAATGTTAAAGGCTTATTGGATCCAAATTTAGAAGTGAAGATTGATGAAGCTCAAATGCAAAGAATGGTTCTGGCTGCATCTCTATGCGTTACACGCGCCGCTAGGCTCCGTCCTAAACTGAACCAGATACTAAGAATCTTAAAAGGAGATGAGAAAGTGGAATATTTGTTCAACTCCTTGGAAAATGATTATGGCCATTCAGAAAATCAAGAAAGCATTGATGATGAAGTGTATCCAAATTCAAGTGCAGAGTTGCACTTGAGCTTGGCATTACTTGGTGTTGAAGATGATACTACATCATATAGCAGTAGAGATCACAGCAATAGTGAACACTCGAAAGAACAATGGAGCAGATCATCAAGTTTTCTTCAACTCTAA 2001 0.3973 MTLDRRFVLVGIRIDSYSRHLLNWALFKVAEPGDYVIAVHVVKNQNYVPKNKALIAGYLEVYEGLCDVKKVGLIGQVFTGSSFRSILVREAKNHAAMALVVGGRTSTAKYCSKRLPPNTNVLAIQDSRIVFRRCTNNQLPGGLMLDPRPSLTSIGNLRDRVIQSESGDSEVESEKSTSQNTIELKEEASNRLERRKLRSSSMFSGDPSDQKLGWPLLRRANSEISSTHHHARDMSVVQWVMSLPDRSPKKSLHSCSSIEENPSERGISDMDDESFKTYAPTYFVEIPKGLEGKLTLNSLNCKWFNLEVLKSCTNHFSSENLIGKGGSNRVYKGVLSDGKLIAVKVLKSTKEALKDFAIEVEIISSLKHKNITSLLGICIEDNALISVYDYFPKGSLEKNLHGKKNKDESIMSWEVRFNIAVRIAEALDYLHMETLKPVIHRDIKSSNILLSHEFEPQLSDFGLALWGPTTSSFLTQEDVVGTFGYIAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSEPCKGQENLVMWAKPIMESGNVKGLLDPNLEVKIDEAQMQRMVLAASLCVTRAARLRPKLNQILRILKGDEKVEYLFNSLENDYGHSENQESIDDEVYPNSSAELHLSLALLGVEDDTTSYSSRDHSNSEHSKEQWSRSSSFLQL* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0183 666 Pfam Protein kinase domain 317 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0183 666 MobiDBLite consensus disorder prediction 186 200 - -
Lan13g0183 666 Gene3D Phosphorylase Kinase; domain 1 288 390 - -
Lan13g0183 666 PANTHER OS08G0249100 PROTEIN 4 644 - -
Lan13g0183 666 CDD USP_Like 8 116 - -
Lan13g0183 666 Gene3D Transferase(Phosphotransferase) domain 1 391 606 - -
Lan13g0183 666 MobiDBLite consensus disorder prediction 640 654 - -
Lan13g0183 666 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 4 644 - -
Lan13g0183 666 SMART serkin_6 316 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0183 666 MobiDBLite consensus disorder prediction 640 666 - -
Lan13g0183 666 ProSiteProfiles Protein kinase domain profile. 316 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0183 666 SUPERFAMILY Protein kinase-like (PK-like) 298 588 IPR011009 -
Lan13g0183 666 MobiDBLite consensus disorder prediction 250 271 - -
Lan13g0183 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Lan13g0183 666 MobiDBLite consensus disorder prediction 163 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0183 Lan-Chr13 1132705 1136356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0183 304 588 Trihelix Transcription Factor Family AT1G70460 44.138 1.85e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan13g0183 Pkinase 6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0183 - - lang:109355495 1096.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1825 8 24693511 24697024 Lan13g0183 13 1132705 1136356 LSH