Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan13g0178 | ATGGGAAGGTCTCCTTGTTGTGAGAAAGCTCACACAAACAAAGGTGCATGGACTAAAGAAGAAGATGATAGACTCATTTCTTATATTCGTTCTCATGGTGAAGGAAGTTGGCGTTCTCTTCCCAAAGCTGCTGGTCTTCTCCGGTGCGGCAAAAGCTGCCGTCTACGGTGGATCAATTACCTCCGTCCTGATCTCAAACGTGGCAACTTTACTGAAGAAGAAGATGAACTCGTCATCAAACTCCATAGTCTTCTTGGTAACAAGTGGTCTTTGATAGCAGCGAGATTACCAGGAAGAACAGACAATGAGATAAAGAATTACTGGAACACTCATATAAGGAGAAAGCTTATGAGTAGAGGAATTGACCCTGCAACTCATAGGCCTCTTAATGATGCTGAGAATCGTGTTCAAGATCATGAAGTTAAAGCATCTGTTGCAGCAACCAATACAATATCTTTTGCTTCATCAGCTTCTGCTGCTGCTGTTGTTGTTAAACAAGAACAAGATCCTAGTATTACTAGTAAATCAAGCATGTTTGGGGTTGTTGATGGCAAAGGAACTTTGTTAGAACGTTGCCCTGATTTGAATCTTGAGTTAACAATTAGTCCTCCTCGTTTGAATGAGCCTGAGCAACCATTCAAGAACATGGATAGAAGCATTTTCTTCGGTTACAATTTGGGTATGCAGAATAGCAATGATTCTAGTGACATTGGCAACAGCACTAGTAGTGGGAAGAGAAATAGTACTAGTACTGGTTATGATTTCTTGGGCTTGAAAACTGGTGTTTGGGATTACAGAAGACTGAAAATGAAATGA | 816 | 0.4081 | MGRSPCCEKAHTNKGAWTKEEDDRLISYIRSHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELVIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRKLMSRGIDPATHRPLNDAENRVQDHEVKASVAATNTISFASSASAAAVVVKQEQDPSITSKSSMFGVVDGKGTLLERCPDLNLELTISPPRLNEPEQPFKNMDRSIFFGYNLGMQNSNDSSDIGNSTSSGKRNSTSTGYDFLGLKTGVWDYRRLKMK* | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan13g0178 | 271 | SMART | sant | 13 | 63 | IPR001005 | - | |
Lan13g0178 | 271 | SMART | sant | 66 | 114 | IPR001005 | - | |
Lan13g0178 | 271 | CDD | SANT | 69 | 112 | IPR001005 | - | |
Lan13g0178 | 271 | SUPERFAMILY | Homeodomain-like | 13 | 108 | IPR009057 | - | |
Lan13g0178 | 271 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Lan13g0178 | 271 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 1 | 235 | - | - | |
Lan13g0178 | 271 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Lan13g0178 | 271 | Pfam | Myb-like DNA-binding domain | 67 | 111 | IPR001005 | - | |
Lan13g0178 | 271 | Gene3D | - | 14 | 66 | - | - | |
Lan13g0178 | 271 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Lan13g0178 | 271 | PANTHER | TRANSCRIPTION REPRESSOR MYB4 | 1 | 235 | - | - | |
Lan13g0178 | 271 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Lan13g0178 | 271 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Lan13g0178 | 271 | Gene3D | - | 68 | 144 | - | - | |
Lan13g0178 | 271 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Lan13g0178 | 271 | Coils | Coil | 129 | 149 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan13g0178 | Lan-Chr13 | 1086793 | 1088091 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan13g0178 | 1 | 271 | MYB Transcription Factor Family | AT4G38620 | 55.634 | 2.98e-101 | 295 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Lan13g0178 | Myb_DNA-binding | 2.3e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan13g0178 | K09422 | - | pop:7494250 | 348.591 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan13g0178 | 13 | 1086793 | 1088091 | Lan13g0178 | 13 | 1086793 | 1088091 | ECH | |
Lan7g0110 | 7 | 598639 | 599915 | Lan13g0178 | 13 | 1086793 | 1088091 | LSH | |
Lan8g1832 | 8 | 24740008 | 24741060 | Lan13g0178 | 13 | 1086793 | 1088091 | LSH |