Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0174 ATGCGTAGAGAGATCTCGTTTCTCGTTCAACCGCGATGTCTCCTTCTCTTCCTTGTCCTCTCAATCTTCATCGTTTTCGCTTTCTCTGCCTCTAAACTGGCTGAGGAGAAAATAGAAGAGAACCCTGAAATTACACACAGAGTATTCTTGGATGTGGATATTGATAAACAACATTTAGGTAGGATCGTGATTGGATTATATGGCCAAGTTGTACCAAAAACTGTAGAAAATTTTAGAGCTTTATGCACAGGGGAGAAGGGCAAGAGTGCCAGTGGCTTAAAGCTTCATTACAAAGGCACACCACTTCATAGGATAATATCTGGTTTCGTGATTCAGGGCGGGGACGTTGTTCATCATGATGGCAAGGGATCTGAATCTATCTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAAACATTCTCATGCTGGCGTTGTCTCTATGGCGAATTCAGGACCTGATTCCAATGGTTCACAGTTTTTCATTACAACAGTAAAGGCCTATTGGTTGGATGGAGATCATGTTGTCTTTGGGAAGGTTGTCCAAGGCATGGATATTGTGTTTGCAATTGAAGGGGGAGCTGGAACCTACAGTGGAAAACCCAGAAAGAAGGTAGTTATTGTAGACTCTGGAGAGATACCCAAGAGCGAGTGGGAAGAGGAACGTTGA 672 0.4315 MRREISFLVQPRCLLLFLVLSIFIVFAFSASKLAEEKIEENPEITHRVFLDVDIDKQHLGRIVIGLYGQVVPKTVENFRALCTGEKGKSASGLKLHYKGTPLHRIISGFVIQGGDVVHHDGKGSESIYGGTFPDENFKIKHSHAGVVSMANSGPDSNGSQFFITTVKAYWLDGDHVVFGKVVQGMDIVFAIEGGAGTYSGKPRKKVVIVDSGEIPKSEWEEER* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0174 223 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 52 211 IPR002130 GO:0000413|GO:0003755
Lan13g0174 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Lan13g0174 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 114 IPR002130 GO:0000413|GO:0003755
Lan13g0174 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 IPR002130 GO:0000413|GO:0003755
Lan13g0174 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 172 IPR002130 GO:0000413|GO:0003755
Lan13g0174 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 188 IPR002130 GO:0000413|GO:0003755
Lan13g0174 223 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 49 213 IPR002130 GO:0000413|GO:0003755
Lan13g0174 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 222 - -
Lan13g0174 223 Gene3D - 34 220 IPR029000 -
Lan13g0174 223 SUPERFAMILY Cyclophilin-like 42 214 IPR029000 -
Lan13g0174 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0174 Lan-Chr13 1053107 1056672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0174 37 211 U-box Gene Family AT5G67530 40.909 9.05e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0174 - - gmx:100800775 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0174 13 1053107 1056672 Lan13g0174 13 1053107 1056672 ECH
Lan7g0107 7 581154 584677 Lan13g0174 13 1053107 1056672 LSH