Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0167 ATGGCTTCTCCTGCTTCCTATTATGAAGTGCTTGGAATTTCAATGGGTGCAAGCTGCTATGAAATAAAATCTGCTTATAGAAAACTTGCAAGGACATGTCACCCTGATGTTGTGGCTATGAATCAGAAGGAAAACTCAGGTAACCAATTCATGAAGATTAATTCAGCTTATTCAACTTTATCTGACCCAGATAAGCGTGCTCAATATGATAGAGAAATATATGGACATAGAAGATCACCAAAAATAGTTTCTATGTCTGGAAGATATCATCAAACAGTTTCTAAATCTGGAAGGAAATGGGAAACTGACCAATGTTGGTAG 321 0.3676 MASPASYYEVLGISMGASCYEIKSAYRKLARTCHPDVVAMNQKENSGNQFMKINSAYSTLSDPDKRAQYDREIYGHRRSPKIVSMSGRYHQTVSKSGRKWETDQCW* 107
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0167 106 Pfam DnaJ domain 7 70 IPR001623 -
Lan13g0167 106 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Lan13g0167 106 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 2 106 - -
Lan13g0167 106 SMART dnaj_3 5 65 IPR001623 -
Lan13g0167 106 SUPERFAMILY Chaperone J-domain 3 75 IPR036869 -
Lan13g0167 106 Gene3D DnaJ domain 1 97 IPR036869 -
Lan13g0167 106 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Lan13g0167 106 CDD DnaJ 7 62 IPR001623 -
Lan13g0167 106 PRINTS DnaJ domain signature 8 26 IPR001623 -
Lan13g0167 106 PRINTS DnaJ domain signature 26 41 IPR001623 -
Lan13g0167 106 PRINTS DnaJ domain signature 45 65 IPR001623 -
Lan13g0167 106 PANTHER - 2 106 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan13g0167 Lan-Chr13 1007319 1007639 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0167 7 70 C2H2 Transcription Factor Family AT1G74250 45.588 8.96e-11 55.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0167 - - adu:107477115 153.295
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0167 13 1007319 1007639 Lan13g0167 13 1007319 1007639 ECH