Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0161 ATGGAAAAACCCTCTATTTTCTGTGTGTTTGTTATAACCTTCATGCTTTGTGTTCTGTCCGAAACTGCTATATCAGAAGATGATTCTGAAGCACTTCTAGCACTGAAATCATCCATTGATGTTGAAAACACACTTCCATGGCAAAAAGGAAGTGATGTGTGTGCATGGTTAGGAGTCAAAGATTGCTTCAACGGAAGGGTCAGAAAGCTAGTGCTAGAATACTCAAACTTAACTGGCACATTAGATTCAAAGATCTTAAACCGTTTAGATCAACTTCGAGTTCTCAGCTTCAAAGGAAACTCACTCTCAGGTCAAATCCCTAACCTCTCTGGCTTAATCAACCTCAAGTCACTTTTTCTCAACAATAACAACTTCTCCGGTGAGTTCCCAGCCTCCGTCACCGACCTCCACCGCGTCAAGGTTATTGTCTTATCAGGAAACAGAATCTCCGGCGAAATCCCGGCGTCTCTGCTGAAACTCCGGCGACTCTATGTACTTTACCTTCAAGACAACTTCTTCACAGGGACAATCCCGGGTTTCAACCAAACCGGACTCAGGTACCTGAATGTATCGGATAACCAACTTTCCGGCGAGATTCCGGTAACTCCTACATTACTCCGGTTCAACGAATCGTCGTTTTACGGAAACCCAAGACTCTGCGGAGAAGAGATTCAAAGAGCATGCAAAAGCAGCAGCAGCATTGTTTCTCCACCTTCTACTAGTCCCAGTTATCCGATGAGACCAGAAGGGCATAAAAGTAAAACAACATGGAGCCGTAAGAAGCTGATAAAAGTAATAGGAGGAAGTGTTGGTGGGGTTGTTTTGTTATTAATATGTTTGGTTTTGTGTTGGTGGGTTTGCAAGAAAAGCAAAGGAAGTAGTGAAGGAATTGGTGACGTGGAGGAGAGAGAAGAAAGAGGTGGAGGAGGAAATGGTGGTGGTGGTGGTGGTGGCAGAGATGGTAATAATGAAAGCAAAGAAGGGGTATTTGCATGGGAGAATGAGGGTGTAGGGAAGTTGGTGTTCCTAGGAGCAGGGGATAGAGAAATGAGATACAGCTTAGAGGATTTGCTGAAGGCATCAGCAGAGACATTGGGGAGGGGTATAATGGGAAGTACATATAAGGCAGTGATGGAGTCAGGGTTCATAGTAACAGTGAAGAGGTTGAAAGATGCAACATATCCAGGGTTGGAAGAGTTTAAGAGAGAGATAGAGATAATTGGAAGGCTTAGACACACTAATTTGGTGCCACTAAGGGCTTATTTTCAAGCTAAGGAAGAACGTCTTTTAGTTTATGATTATTTCCCTAATGGCAGCCTCTTTTCTCTCATTCATGGATCGAAAACAACCGGTGGCGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATTGCAGAAGATCTTGCAACCGGCATGCTCTATATCCATCAGACAAACCCCGGCTTAACTCATGGAAACCTGAAATCTTCGAATGTCTTGCTCGGCTCTGACTTTGAGTCCTGTCTTACTGATTATGGTATTACTATGTTCCTTAATCCTGACTCAATGGATGAACCTAGTGCCACTTCTTTATTCTATAGAGCGCCCGAATGCCGTAGCTTTCAGAGGCCACACACTCAACCAGCTGATGTATACAGCTTCGGCGTCCTTCTCCTTGAGCTTTTGACAGGAAAAACACCCTTTCAAGACCTTGTTCAGGCACATGGCTCCGACATACCTAGGTGGGTTCGGTCTGTGCGCGAAGAAGAGACGGAGTCAGGGGATGACCCAGCCTCAGGAAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGACATGTGTTTCACTAGTACCGGAGAATCGGCCTACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGGGGAAGCTCATGTTTCATCTAATAGCAGTGATCATTCACCTGGTAGATGGTCAGATACTGTTCAAAGCATTCCAAGGGAAGAACACTTGAGCATATGA 1998 0.4444 MEKPSIFCVFVITFMLCVLSETAISEDDSEALLALKSSIDVENTLPWQKGSDVCAWLGVKDCFNGRVRKLVLEYSNLTGTLDSKILNRLDQLRVLSFKGNSLSGQIPNLSGLINLKSLFLNNNNFSGEFPASVTDLHRVKVIVLSGNRISGEIPASLLKLRRLYVLYLQDNFFTGTIPGFNQTGLRYLNVSDNQLSGEIPVTPTLLRFNESSFYGNPRLCGEEIQRACKSSSSIVSPPSTSPSYPMRPEGHKSKTTWSRKKLIKVIGGSVGGVVLLLICLVLCWWVCKKSKGSSEGIGDVEEREERGGGGNGGGGGGGRDGNNESKEGVFAWENEGVGKLVFLGAGDREMRYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDATYPGLEEFKREIEIIGRLRHTNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTTGGGKPLHWTSCLKIAEDLATGMLYIHQTNPGLTHGNLKSSNVLLGSDFESCLTDYGITMFLNPDSMDEPSATSLFYRAPECRSFQRPHTQPADVYSFGVLLLELLTGKTPFQDLVQAHGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMTCVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSIPREEHLSI* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0161 665 MobiDBLite consensus disorder prediction 636 665 - -
Lan13g0161 665 MobiDBLite consensus disorder prediction 231 255 - -
Lan13g0161 665 Pfam Leucine rich repeat 114 171 IPR001611 GO:0005515
Lan13g0161 665 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 655 - -
Lan13g0161 665 Gene3D Ribonuclease Inhibitor 182 231 IPR032675 -
Lan13g0161 665 SUPERFAMILY Protein kinase-like (PK-like) 363 637 IPR011009 -
Lan13g0161 665 Gene3D Phosphorylase Kinase; domain 1 342 434 - -
Lan13g0161 665 MobiDBLite consensus disorder prediction 294 308 - -
Lan13g0161 665 Gene3D Transferase(Phosphotransferase) domain 1 435 652 - -
Lan13g0161 665 MobiDBLite consensus disorder prediction 639 665 - -
Lan13g0161 665 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
Lan13g0161 665 Pfam Protein kinase domain 362 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0161 665 MobiDBLite consensus disorder prediction 291 325 - -
Lan13g0161 665 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 5 655 - -
Lan13g0161 665 SUPERFAMILY L domain-like 25 222 - -
Lan13g0161 665 ProSiteProfiles Protein kinase domain profile. 359 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0161 665 Pfam Leucine rich repeat N-terminal domain 26 59 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0161 Lan-Chr13 975465 980251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0161 8 665 Receptor kinase-like Gene Family AT1G60630 62.312 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan13g0161 Pkinase 5.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0161 - - gmx:100809866 976.081