Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0151 ATGATTCTTCAATCACCTTCTCTGAATTTCCATTTCTCACATATTTTCCCTTCTCTTTGTCAGCGCACCAATGAAGTTAACAACTTTGTTGCATCCCCTTCCCGAAGAAGAAGAACAAAACGCTCCATTGTTCATTCTGGGTATCGAAATTTCCGAAGAAGATTGAGCCTTTGCTTCTGTGCTGTTACCACAGGTTATAGTTCCAATCGAAATTGGAATGCGGAATTCGAAAATTCAACTAGAAGGGGTGTCCAAAGTTTCGTTTTTGAACAGTTTTCTAATGAAATTGAAGAGGATAATGATCATGGTGTGTCTCAGTCACAAGAGTCACAACAGGTTCAATCAGGTTCAACTTCAAAGTTTACTAGTTTTCAAGAAGATCCTATTGTAGATAAGTTAAGAACACAATTAGGGGTGATTCACCCAATTCCATCGCCTCCTATTAACCGAGACGTGATTGGTTTGTTTGTGTTCTTTTTCTTTGTCGGCATTGTGTTTGATAAATTGTGGACTTCAAGGAAAAGGAACAAAGTCAGTGGTGAAGATAGCTTGCGCGATGTGTTGCCGCAGGTGCCAACAAGCTCCTTTTGGTTTTTGGAAAAGGATTTGCAGAGAAAGGAATCAGTTGAATGGGTGAACATGGTGCTTGGGAAGTTATGGAAGGTTTATAGAGGTGGAATTGAGAACTGGATTATTGGGCAGCTTCAGCCTGCTATTGATGACTTGCAGAAACCTGATTATGTGCAGAGGGTCGAGGTTACGCAATACTCATTGGGGGATGAACCGTTGTCTGTTAGGAATGTTGAACGCAAGACTTCTCGCAGTGTGAACGATTTGCAGTACCAGATAGGCCTCAGGTATACTGGTGGTGCTCGCATGCTATTAATTCTTTCTCTTAAATTTGGCGTTATGCCAATTGAGGTGCCTGTTGTTGTTCACGATTTTGACATTGATTGTGAACTTTGGGTAAAAATGCGACTGATACCAACAGAACCATGGGTGGGATCTGCTTCATGGGCTTTTGTTTCTCTTCCCAACATCAAGTTTCAATTGTCTCCATTTCGCAAATTCAATTTAATGACAATTCCAGTACTCTCAATGTTTTTGACTAAACTTCTTACTGAAGATTTACCCAGACAATTTGTATACCCAGAGAAAATTGATTTGGATTTCCAAATGGGAAAAACAGTTGGTCCTGTTGCTAACGATGTTAAATCTGGAGAGATGCAAGATGGGAAAAGAAATTTTGTTGGCGAACTATCTGTTACCCTTGTGGATGCTCGAAAGCTTCCTTATCTTTTCCGTGCCAAGACAGATCCTTATGTTATTCTTAGTCTTGGAGATCAAATTATAAGCAGCAAAAAGAACAGCCAGACTACTGTCATTGGGCCTCCTGGAATGCCGATTTGGAATCAAGATTTTCATATGCTTGTTGCAAACCCTAATAAGGAGAAGTTACTTGTCCAGGTTAAGGACTCACTTGGATTTGCAGATTTTACTATAGGTACAGGAGAGGTTGATTTGGGATCTCTTGAAGACACTGTACCAGCAGACAGGATTGTGGTTCTACAAGGAGGTTTGGGAATTTTAAGAAAGGCTTCTCGTGGGGTGGTATTACTACGGCTAACGTATAAAGCATACGTGGAGGATGACGAGGATGACGAAACTGCTGAGGATGCCATTAATATAGATGCTTCGGATGATAAGTTGTCGGATTCAGAAGAAGCACATGTCACTGATAAGAAGAATGAAGGAGATACTATGCACCAAACTGATAATAAGTCATTTATGGATGTATTGGCAGCATTGGTTGTTAGTGAAGAATTCCAAGGAATAGTAGAATCTGAAACTGGGTCTACCAACAATTTGGATAATAGTTCAAATACAGGCTCAAAAGTATCAAAATCTCCTGTTGCCAATGTTGAGTCAATTCCTTCCACTCTTGATAACTCTGAAGCTTTTGTAGGGTCTGCATTGATTTGGTTTGCTGTGGTTACTGGCATATCACTACTAATTGCACTCAACATTGGTGCTTCAAGTTACTTCAATCCTTGA 2055 0.4024 MILQSPSLNFHFSHIFPSLCQRTNEVNNFVASPSRRRRTKRSIVHSGYRNFRRRLSLCFCAVTTGYSSNRNWNAEFENSTRRGVQSFVFEQFSNEIEEDNDHGVSQSQESQQVQSGSTSKFTSFQEDPIVDKLRTQLGVIHPIPSPPINRDVIGLFVFFFFVGIVFDKLWTSRKRNKVSGEDSLRDVLPQVPTSSFWFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGQLQPAIDDLQKPDYVQRVEVTQYSLGDEPLSVRNVERKTSRSVNDLQYQIGLRYTGGARMLLILSLKFGVMPIEVPVVVHDFDIDCELWVKMRLIPTEPWVGSASWAFVSLPNIKFQLSPFRKFNLMTIPVLSMFLTKLLTEDLPRQFVYPEKIDLDFQMGKTVGPVANDVKSGEMQDGKRNFVGELSVTLVDARKLPYLFRAKTDPYVILSLGDQIISSKKNSQTTVIGPPGMPIWNQDFHMLVANPNKEKLLVQVKDSLGFADFTIGTGEVDLGSLEDTVPADRIVVLQGGLGILRKASRGVVLLRLTYKAYVEDDEDDETAEDAINIDASDDKLSDSEEAHVTDKKNEGDTMHQTDNKSFMDVLAALVVSEEFQGIVESETGSTNNLDNSSNTGSKVSKSPVANVESIPSTLDNSEAFVGSALIWFAVVTGISLLIALNIGASSYFNP* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0151 684 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 418 546 IPR035892 -
Lan13g0151 684 SMART C2_3c 419 520 IPR000008 -
Lan13g0151 684 Gene3D C2 domain 399 547 IPR035892 -
Lan13g0151 684 Pfam C2 domain 418 517 IPR000008 -
Lan13g0151 684 MobiDBLite consensus disorder prediction 563 591 - -
Lan13g0151 684 ProSiteProfiles C2 domain profile. 405 521 IPR000008 -
Lan13g0151 684 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 205 392 IPR031468 GO:0008289
Lan13g0151 684 MobiDBLite consensus disorder prediction 99 121 - -
Lan13g0151 684 MobiDBLite consensus disorder prediction 615 638 - -
Lan13g0151 684 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 24 684 - -
Lan13g0151 684 MobiDBLite consensus disorder prediction 105 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0151 Lan-Chr13 908448 913943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0151 410 511 C2H2 Transcription Factor Family AT4G05330 33.981 3.15e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0151 - - gmx:100817508 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0087 7 468238 473993 Lan13g0151 13 908448 913943 LSH
Lan8g1845 8 24813542 24819559 Lan13g0151 13 908448 913943 LSH