Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0145 ATGTACTTTAGGAGAATACAGGGCAGAGATCGGAGATGGGCTTTAGTATTGCAGCCAACAAAATACTTTTTCTTGCCAAGATTCTCTAGTGCTGCATGCTTTCGATCTTTGTCGCCCAAGAGCCCTGTGAAAGAATGCTCATCACATGGTAGTATCATTAGAAGGCATCTTCTAGGTTCAAATTCATTGAGGCATGTAGCAAGTGCTTCTTCTACAAATAGTTGTACCGGTCTGGACAAAAGGCCTAGTTTATGGAGTGCACTTGTACGTGCATATAGTTCTGAAAGCGATGGAAGAAATGCAAGTGAGGATAAGCATGTACATGTTAATGTTGGATCTAACCTCAGTAAGGGACAGAATCAACAAGAGATGTCGGGGAAAGATGTCAAGTGCTGCAATGCACACTCACATGCACAAATAGGAGAACAAGACCAAGAGGAATGGCTTAACAATGAGAAGCTTTCCATAGAAAGTAAAAAGAGAGAATCACCATTTTTGACAAGAAAGGATAAGTTTAAAAACGAGTTTCTTAGAAGAATAGTTCCTTGGGAGAAGATAAACATTTCATGGGACACATTTCCTTATCAAATTAATGCATATACAAAAGATCTTCTTGTGGAATGTGCTGCCTCCCATTTGAGACACAATAAGTTTGCTTTGTCTTTTGGCACTCGCCTCAAATCTTCAAGTGGAAGAATATTGCTTCAGAGCATTCCTGGCACTGAGCTCTATCGTGAAAGAGTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCTTTGTTGGTGCTTGATAGTAGCACCATTGCTCCTTATGATATGGATGATGATTTATCAGACTACGAGTCTGATGACGATAATGAAGACTCGGAAGAAGAAGATTCAATAGAGTCCGAGAATGAGGATGACAATGATGCTAGCAGTACCGAGGTAAAGCCAGATGTAAGTGATAATGATGATGCACTTGCACATGCTGAAGCAGCTCTTAAGAAGGTTGAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAAGAATTTGACAAGATTGAGTCCGTAAGACCTGAGAGTTCTGAATCATCTAAGTCTATTGATGCCAAGTCTTCTGATAAATCTGAATGCCGGCTAAGGAAAGGCGACCGTGTGAAGTACGTTGGGCCATCTGTTACAGCTGACGATAGGCCTTTAACCAGTGGTCAGAGAGGAGAGGTATATGAAGTGAATGAAGATCAAGATCGAGTTGCTGTCCTCCTGGACATTAATGAAGAAAGTGCCAATGAGGGTGAGGTAGAGAAACTTAATGACGAGCATAGAAAGCCAGCGATTTATTGGATAAATGTTAAGGACGTTGAGAATGATCTTGATGCACTTGGACAGGATTGCTACATAGCAATGGAGGCATTATGTGAGGTTCTGAAATCCAGACAACCTCTTATTGTCTATTTTCCAGACTGTTCACAGTGGCTGCATAAATCAGTTCCTAAGTCAAAACAAAATGAGTTTTTTCATAAGGTCGAAGAGATGTTTGACAAGTTATCTGGTCCCGTAGTGTTGATTTGTGGGCAAAACAAAGTTCAGTCAGGATCAAAGGAAAAAGAACAATTTACAATGATACTTCCGAACTTAGGCCGTGTTGCTAAGCTGCCTTTGTCTCTGAAACGGTTGACTGACGGATTTAAAGGGACAAAGAGCTCGGAAGATGATGGAATTCACAAGCTTTTCTCTAATATTTTGTGTGTACATCCACCTAAGGATGATAATCTGCTAGCAACATTTAAGAAACAACTTGATGATGATAGGAAATTTGTCATTTCACGTAGCAATTTTAATGAACTACGGAAGGTTCTTGAAAAGCATCAGCTATCATGCACAGACCTATTGCACGTAAATACTGATGATGTCATTTTGACAAAGCAAAAAGCTGAAAAGGTTGTAGGGTGGGCAAAAAATCATTACTTGTCATCATGTCTGCTTCCCTCTGTTAAAGGAGAACGATTGTGCCTCCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGGATGAAGGATCAGGAAACTATATCACAGAAGCCTTTTGAGAACTTCAAGAGCCTTGCAAAGGATGAGTTTGAGCGCAATTTCCTATCAGCCGTAGTACCCTCTGATGAAATTGGGGTGAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAACTTGTTATTCTTCCAATGAGAAGGCCAAATCTTTTCTCCCGCGGAAACTTGTTGCGGCCCTGCAAAGGAATATTACTCTTCGGTCCTCCTGGAACTGGGAAAACTCTATTGGCCAAGGCACTTGCAACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCAACTCTTACTTCAAAGTGGTTTGGAGATGCGGAAAAACTAACTAAAGCCCTTTTCTCCTTTGCCAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGAGGTGGTGCCTTTGAACATGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAACCAAAGAATCCTCATTCTTGGTGCAACAAACAGACCATTCGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAATGAAGATTTTAAGAATAGTCCTTGCTCAAGAAAATTTGGTTCCCAATTTTGAGTATGACAAACTTGCTAAGTTGACTGAAGGATATTCTGGCAGTGATTTGAAGAACCTTTGTATTGCTTCTGCATATAGGCCTGTTCAAGAGCTCATAGAGGAAGAGAAAAAGGGAGGAGATAATGCCATGCCTTCAGTATTAAGGCCTCTTAATTTAGATGATTTTGTTGAGTCAAAAGGCAAGGTGGGGCCCTCAGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAATGACATGTATGGAGAAGGTGGTAGTAGGACAAAATCACCATTTGGATTTGGTAGCTGA 3036 0.4071 MYFRRIQGRDRRWALVLQPTKYFFLPRFSSAACFRSLSPKSPVKECSSHGSIIRRHLLGSNSLRHVASASSTNSCTGLDKRPSLWSALVRAYSSESDGRNASEDKHVHVNVGSNLSKGQNQQEMSGKDVKCCNAHSHAQIGEQDQEEWLNNEKLSIESKKRESPFLTRKDKFKNEFLRRIVPWEKINISWDTFPYQINAYTKDLLVECAASHLRHNKFALSFGTRLKSSSGRILLQSIPGTELYRERVVRALAQDLQVPLLVLDSSTIAPYDMDDDLSDYESDDDNEDSEEEDSIESENEDDNDASSTEVKPDVSDNDDALAHAEAALKKVEAAVQKLVPYNIEEFDKIESVRPESSESSKSIDAKSSDKSECRLRKGDRVKYVGPSVTADDRPLTSGQRGEVYEVNEDQDRVAVLLDINEESANEGEVEKLNDEHRKPAIYWINVKDVENDLDALGQDCYIAMEALCEVLKSRQPLIVYFPDCSQWLHKSVPKSKQNEFFHKVEEMFDKLSGPVVLICGQNKVQSGSKEKEQFTMILPNLGRVAKLPLSLKRLTDGFKGTKSSEDDGIHKLFSNILCVHPPKDDNLLATFKKQLDDDRKFVISRSNFNELRKVLEKHQLSCTDLLHVNTDDVILTKQKAEKVVGWAKNHYLSSCLLPSVKGERLCLPRESLEIAISRMKDQETISQKPFENFKSLAKDEFERNFLSAVVPSDEIGVKFDDIGALEDVKKALNELVILPMRRPNLFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIVLAQENLVPNFEYDKLAKLTEGYSGSDLKNLCIASAYRPVQELIEEEKKGGDNAMPSVLRPLNLDDFVESKGKVGPSVAYDATSMNELRKWNDMYGEGGSRTKSPFGFGS* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0145 1011 SMART AAA_5 754 891 IPR003593 -
Lan13g0145 1011 Gene3D - 717 993 IPR027417 -
Lan13g0145 1011 CDD AAA 756 889 - -
Lan13g0145 1011 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 55 388 - -
Lan13g0145 1011 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 390 1009 - -
Lan13g0145 1011 MobiDBLite consensus disorder prediction 274 303 - -
Lan13g0145 1011 Gene3D - 890 975 - -
Lan13g0145 1011 MobiDBLite consensus disorder prediction 272 316 - -
Lan13g0145 1011 Pfam ATPase family associated with various cellular activities (AAA) 758 888 IPR003959 GO:0005524|GO:0016887
Lan13g0145 1011 MobiDBLite consensus disorder prediction 351 372 - -
Lan13g0145 1011 Pfam AAA+ lid domain 912 947 IPR041569 -
Lan13g0145 1011 ProSitePatterns AAA-protein family signature. 861 880 IPR003960 GO:0005524|GO:0016887
Lan13g0145 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 716 938 IPR027417 -
Lan13g0145 1011 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 55 388 - -
Lan13g0145 1011 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 390 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0145 Lan-Chr13 841381 852199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0145 717 949 Calmodulin-binding Proteins AT3G56690 37.288 1.02e-38 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0145 - - gmx:100812718 1521.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1853 8 24845100 24875069 Lan13g0145 13 841381 852199 LSH