Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0138 ATGCCCACTTTCTGTACCATACTCTCATGCTGCCTCCTTATCATTACTACTATGTCAGTCTCTACTGTTGCTTCCATGAGAGAATATTTCGATATGGAGGCACGACAACAAGAGACTGACATAGTAAATAACTTGCCGGGGCAGCCCCCGGTGAAATTCAGACACTATGCTGGTTATGTGAAGCTAAGACCAAATGAAGAGAAGGCATTGTTCTACTGGTTCTTTGAAGCTCAACAAGAACCCTCACATAAGCCTCTTGTGCTTTGGCTCAATGGAGGACCTGGTTGTTCCTCCATTGCATATGGAGCTGCAAGAGAGCTTGGTCCATTTCTAGTTAAAGACAAAGAAGGACTAACACTTAACCAATTCTCATGGAACAAAGTTGCAAATATCATATTCTTGGAGTCACCAATTGGTGTTGGCTTTTCTTACACAAACATTTCCAAAGATTTGCATGAACTTGGAGATCGAGTTTCTGCTATTGATAACTATGCATTTTTGGTTGGTTGGTTCAAAAGGTTCCCAAGCTTTAGATCCCATGATTTTTATATTGCTGGAGAGAGTTATGCAGGCCATTATGTTCCACAGCTTGCTGAACTTATCTATGAAGGAAACAAACATACCAAAAAGAGTACTCAAATAAATTTCAAGGGATTCATGATTGGAAATGCTGTGATCAATGATCTTACAGATACAAATGGAATGATTGATTATGCTTGGAGCCATGCTATCATCTCAGATGAAATATACCATGGGATAAACAATGATTGTGACTTTAGAGCAGAAAATCAAACAAAGGCTTGTGATTTGCATGTTACAGGGCTATTGCAAGCTTACTCAGATATTGACATATATAGCATTTACTCACCCATTTGCCTCAATAAATATCAAAGAGCAGTTTCACCCAAACTTCTTGTTGCTCCTCATCTTCTCACACGACATGAGTTGTGGCATACACTACCATCGGGATACGATCCCTGTACAGAGGATTATGTCGCCAAATATTTCAATGATAAGGATGTCCAAAAGGCCCTGCATGCCAATATTACCAACTTATCATATCCCTATACCCTTTGCAGCTCTGTAATTCAGAAATGGAATGACTCACCAAACACAGTCCTGCCAATTATTCAAAAGCTCTTACATGCCGGCTTACGCATATGGATCTACAGTGGTGACACTGATGGTAGAGTACCAGTGACATCAACAAGATACAGCATAAAGAAGATGGGATTGAAAGTAAAGAAAGGGTGGAGAGCATGGTTTGATAAGAATGAAGTTGCAGGGTGGATGGAAGAGTATGAAGGTGGCCTTACATTTGTAACCATTAGAGGTGCTGGTCATCAGGTTCCGGTCTTTGCACCTCACCAATCCCTTTCTCTCTTCACTCATTTCCTCTCTGCTCAAACCCTCCCTTCTTCTCGCTTCTAG 1431 0.4088 MPTFCTILSCCLLIITTMSVSTVASMREYFDMEARQQETDIVNNLPGQPPVKFRHYAGYVKLRPNEEKALFYWFFEAQQEPSHKPLVLWLNGGPGCSSIAYGAARELGPFLVKDKEGLTLNQFSWNKVANIIFLESPIGVGFSYTNISKDLHELGDRVSAIDNYAFLVGWFKRFPSFRSHDFYIAGESYAGHYVPQLAELIYEGNKHTKKSTQINFKGFMIGNAVINDLTDTNGMIDYAWSHAIISDEIYHGINNDCDFRAENQTKACDLHVTGLLQAYSDIDIYSIYSPICLNKYQRAVSPKLLVAPHLLTRHELWHTLPSGYDPCTEDYVAKYFNDKDVQKALHANITNLSYPYTLCSSVIQKWNDSPNTVLPIIQKLLHAGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKVKKGWRAWFDKNEVAGWMEEYEGGLTFVTIRGAGHQVPVFAPHQSLSLFTHFLSAQTLPSSRF* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0138 476 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Lan13g0138 476 Gene3D - 373 467 - -
Lan13g0138 476 Gene3D - 327 364 - -
Lan13g0138 476 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 35 31 469 - -
Lan13g0138 476 SUPERFAMILY alpha/beta-Hydrolases 36 472 IPR029058 -
Lan13g0138 476 Gene3D alpha/beta hydrolase 36 294 IPR029058 -
Lan13g0138 476 ProSitePatterns Serine carboxypeptidases, histidine active site. 438 455 IPR033124 GO:0004185
Lan13g0138 476 Pfam Serine carboxypeptidase 46 467 IPR001563 GO:0004185|GO:0006508
Lan13g0138 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 469 IPR001563 GO:0004185|GO:0006508
Lan13g0138 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Lan13g0138 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Lan13g0138 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Lan13g0138 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0138 Lan-Chr13 808511 812883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0138 332 471 Calmodulin-binding Proteins AT2G22960 31.206 1.11e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0138 K16297 - gmx:100799746 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1866 8 24952246 24957805 Lan13g0138 13 808511 812883 LSH