Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0132 ATGGCTTCCTTCTCTGCTACAATGTCGAACCCTAAGGTTTTCTTCGATATGGCCATCGGCGGCACTCCCGTCGGCCGCATCGTCATGGAGCTACACGCCGATACCACTCCTCGCACCGCTGAGAACTTCCGTGCTCTCTGCACCGGCGAGAAGGGAGTTGGCCGCAGTGGCAAGCCACTCCACTTCAAGGGATCATCCTTCCACCGTGTTATCCCTAACTTCATGTGCCAGGGAGGTGACTTCACCGCCGGAAATGGCACCGGAGGTGAATCAATCTATGGAGCCAAGTTCGAAGATGAGAACTTCATAAAGAAGCACACAGGTCCTGGAATATTGTCCATGGCGAATGCTGGACCCGGAACGAACGGATCTCAGTTTTTCATTTGCACGACGAAGACGGAGTGGCTTGACGGAAAGCACGTGGTGTTTGGTGAAGTGGTGGATGGATTGAACGTGGTGAAGGAGATCGAGAAAGTTGGATCTAGCTCCGGCAAGACCTCCAGGCCAGTGACCATCGCCGATTGCGGTCAAGTCTCTTAG 540 0.5407 MASFSATMSNPKVFFDMAIGGTPVGRIVMELHADTTPRTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTAGNGTGGESIYGAKFEDENFIKKHTGPGILSMANAGPGTNGSQFFICTTKTEWLDGKHVVFGEVVDGLNVVKEIEKVGSSSGKTSRPVTIADCGQVS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0132 179 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 62 79 IPR020892 GO:0003755|GO:0006457
Lan13g0132 179 Gene3D - 2 179 IPR029000 -
Lan13g0132 179 PIRSF Peptidylpro_ismrse 1 179 IPR024936 GO:0003755
Lan13g0132 179 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 176 IPR002130 GO:0000413|GO:0003755
Lan13g0132 179 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 31 46 IPR002130 GO:0000413|GO:0003755
Lan13g0132 179 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 79 IPR002130 GO:0000413|GO:0003755
Lan13g0132 179 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 125 IPR002130 GO:0000413|GO:0003755
Lan13g0132 179 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 137 IPR002130 GO:0000413|GO:0003755
Lan13g0132 179 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 IPR002130 GO:0000413|GO:0003755
Lan13g0132 179 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 14 177 IPR002130 GO:0000413|GO:0003755
Lan13g0132 179 SUPERFAMILY Cyclophilin-like 6 178 IPR029000 -
Lan13g0132 179 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 178 - -
Lan13g0132 179 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 178 - -
Lan13g0132 179 CDD cyclophilin_ABH_like 11 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0132 Lan-Chr13 767132 795144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0132 25 159 U-box Gene Family AT5G67530 49.265 4.84e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0132 K01802 - csv:101206458 323.553