Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0127 ATGGATTCACCTAATAATTTCCAAGTAGTTGATAATATTGAACAATTTCCGAGGCATGTTCATGGTTATGAGACAACAAGGTGCTTATTTCCTAAGATGTCTTTAGACACCAAACTTCTTTCCTCCCTTGGTGCCCATGAACTTCTCAGAATAGAGACATGGAAGGGAGCTTTGACAGAATTAGTAGCAACTGCATCATTAATGTTTACCTTAACAACTTCAATTATTGCATGCTTGGACTCACATGAGGTTGATCCTAAGTTTCTTGTTCCTTTTGCAGTTTTCATCATAACCTTCTTATTTCTTATAGTAACAGTTCCTATATCTGGAGGCCATATGAACCCTGTTTTCACATTCATAGCCACTCTAAAGGGTCTTATCACTCTTTCACGTGCTCTTATTTACATGTTAGCACAATGCATGGGTTCAATAATTGGTTTCTTCATAATTAAGAGTGTGATGGACCCAAAATTAGTGCAAATATATTCATTGGGTGGGTGTGTAATTAGTGGCATAAAGCAACAACAAGCTTTGTTATTAGAATTTTCATGCACGTTTGTGGTACTCTTTATAGGTATAACATTAGCATTTGATAAGAAAAAATCTAAGGATTTGGGGTTGCCTATGGTGTGTTTGGTGGTGGCTGGGGCCATGGGCCTGGCAGTATTTGTGTCTATAACTGTAACTGGGCAAGTGGGCTATGCTGGTGTGGGCTTAAACCCAGCAAGATGTTTAGGCCCGGCATTGGTTTATGGAGGCCCGTTGTGGAATGGGCATTGGGTTTTTTGGGTTGGGCCTTTCTTGGCCTGTATGGGATATTATGCTGTCTCTATCAACCTACCAAAGGAGGGTTTGGTTTTGGTTGATGGAGAATATGATGTGTTAAAGCTGGCTATGGGTTCTTGTGGAAATATCAATGTCTCCAATGTTGCTGTCTCAAGTGATATTTAA 951 0.3975 MDSPNNFQVVDNIEQFPRHVHGYETTRCLFPKMSLDTKLLSSLGAHELLRIETWKGALTELVATASLMFTLTTSIIACLDSHEVDPKFLVPFAVFIITFLFLIVTVPISGGHMNPVFTFIATLKGLITLSRALIYMLAQCMGSIIGFFIIKSVMDPKLVQIYSLGGCVISGIKQQQALLLEFSCTFVVLFIGITLAFDKKKSKDLGLPMVCLVVAGAMGLAVFVSITVTGQVGYAGVGLNPARCLGPALVYGGPLWNGHWVFWVGPFLACMGYYAVSINLPKEGLVLVDGEYDVLKLAMGSCGNINVSNVAVSSDI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0127 316 Pfam Major intrinsic protein 50 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan13g0127 316 Gene3D Glycerol uptake facilitator protein. 40 280 IPR023271 -
Lan13g0127 316 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 26 309 - -
Lan13g0127 316 SUPERFAMILY Aquaporin-like 46 270 IPR023271 -
Lan13g0127 316 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan13g0127 316 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan13g0127 316 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan13g0127 316 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan13g0127 316 PRINTS Major intrinsic protein family signature 221 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan13g0127 316 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan13g0127 316 PANTHER AQUAPORIN-LIKE 26 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0127 Lan-Chr13 744317 745721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0127 47 270 Major Intrinsic Protein MIP AT3G61430 31.169 5.65e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0127 K09866 - gmx:100804160 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0127 13 744317 745721 Lan13g0127 13 744317 745721 ECH