Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0120 ATGATAAGCGTGATAAGGCTTATAGCCATGGCAAGAAAGTGGCAGAAAATGGCAGCTAGAAAGCGCAAAACAATTTCTTACAAAGTAGATCATCGTATGCATTCTTCAGAAGTAAACAAGGGTCACTTTGTTGTTTATAGCATGGATCATAAGAGATTTGTGGTTCCACTCAAGTTTCTTAGCACCATTGTCTTTAGAGAACTTCTCAAATGGTCGGAGGAAGAGTTTGGATTACCATCAAATGGACCTATTATGTTACCTTGTGATAGTGTATTCTTGGAATATGTAATCTCTTTAGTTCAAGAACATGTTCCTGTAGATGTAGAAAAGGCTTTGATTACTTCAATGGTTGTATGTCACAATGAGGCATCTTCTTGTTATGGTCTAAGTCAAAGCCATGAACAAACAATCATCTATGGCTTTTAA 426 0.3662 MISVIRLIAMARKWQKMAARKRKTISYKVDHRMHSSEVNKGHFVVYSMDHKRFVVPLKFLSTIVFRELLKWSEEEFGLPSNGPIMLPCDSVFLEYVISLVQEHVPVDVEKALITSMVVCHNEASSCYGLSQSHEQTIIYGF* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0120 141 Pfam Auxin responsive protein 12 99 IPR003676 GO:0009733
Lan13g0120 141 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 141 - -
Lan13g0120 141 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 141 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0120 Lan-Chr13 710489 711126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0120 3 100 Calmodulin-binding Proteins AT4G34750 34.343 4.77e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0120 - - ccaj:109798531 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0120 13 710489 711126 Lan13g0120 13 710489 711126 ECH