Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0118 ATGAGTGGGGAAATTACACTTCCAGGCTTCAGATTTCATCCCACAGAAGAAGAACTCGTTGATTTCTACCTTAAGAACATGGTTGTTGGCAAGAAATTTCGTTATGATGTCATTGGTTTCCTCAACATCTATCACCATGATCCATGGGAATTGCCTGATTTGTCAAAGATGGGGGAAAGAGAATGGTACTTCTTTGTGCCAAGGGACAAGAAGCATGGTAGTGGAGGAAGGCCTAACCGCACCACTGAGAAAGGGTTCTGGAAAGCAACCGGTTCGGACCGGAAAATCGTCACTTTATCCGATCCTAAGCGCATCATTGGGTTGAGGAAGACCCTGGTTTTTTATGAAGGAAGAGCACCAAGGGGATACAAAACTGATTGGATCATGAATGAATACCGTTTACCAGATAATTGCAAATTACCAAAGGAAATAGTGTTGTGCAAGATATATAGAAAGGCAACTTCATTGAAAGTGCTGGAACAAAGGGCAGCATTAGAGGAAGAAACTAAGCAATTGATTGCTTCCTCTCCTTCCTCTACGGACACCATGTCCTACAACAGCCAAATGGAAGACCAAACCATGCCCTTAACCTCTTTCCAACATGTTGCACTTAAGAAAGAAGCTGAAGTTGAAATTGAAGAAATGGTATCAATACCAATGCAAGAAAACAAAAAGAGTTGTGTTACATCAATACAATTACCCTTAGGAAGTGAAATTCTGCCAGAGCTTCAGTTACCAATGATGACCACAGATTGGACCCAAGATAGCTTTTGGGCTCAGTTGAATAGTCCATGGCTTCAAAACTTTACTCCTACTTACTCCAACATCTTAAACTTTTAG 840 0.4131 MSGEITLPGFRFHPTEEELVDFYLKNMVVGKKFRYDVIGFLNIYHHDPWELPDLSKMGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGYKTDWIMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEQRAALEEETKQLIASSPSSTDTMSYNSQMEDQTMPLTSFQHVALKKEAEVEIEEMVSIPMQENKKSCVTSIQLPLGSEILPELQLPMMTTDWTQDSFWAQLNSPWLQNFTPTYSNILNF* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0118 279 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 5 279 - -
Lan13g0118 279 SUPERFAMILY NAC domain 7 152 IPR036093 GO:0003677|GO:0006355
Lan13g0118 279 Gene3D NAC domain 15 156 IPR036093 GO:0003677|GO:0006355
Lan13g0118 279 ProSiteProfiles NAC domain profile. 6 152 IPR003441 GO:0003677|GO:0006355
Lan13g0118 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 279 - -
Lan13g0118 279 Pfam No apical meristem (NAM) protein 8 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0118 Lan-Chr13 699941 701874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0118 1 271 NAC Transcription Factor Family AT2G17040 58.696 2.07e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan13g0118 NAM 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0118 - - gmx:732555 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0118 13 699941 701874 Lan13g0118 13 699941 701874 ECH
Lan8g1875 8 25003740 25005286 Lan13g0118 13 699941 701874 LSH