Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0117 ATGCTTCAAAGCTTGGTCCCTCGTCACTCTCTCTCTTCAAACCCTAACGCTATTTCTTCCATGTCGACGAAGCGAGCCAACCGCGACGACGGCGATTCCCCCGGCGAAGGGCCATCCTTCAAGAGACAGAACTCCGGGAGGAATTTCCCCGCCGATAAGACGGTGGAATCTGCCGAGGGAAACGAGGAGGAACAAATCTTCGAACCAGAACCTCAATCTCATGGCGAATCTACTGGTCTCAAACTCTTAGGGCTTTTGCTTCAATGTGCTGAGTGCGTCGCCATGGATAACCTTGACTTCGCCAACGATCTTTTACCGGAGATCGCAGAGCTCTCGTCGCCGTACGGTACTTCGCCGGAGCGTGTTGGAGCTTACTTCGCTCAGGCGCTGCAAGCACGTGTGGTGAGTTCTTGTCTCGGAACCTACACGCCACTGTTGACGAAATCGGTGATCCTAACTCAGTCGCAGCGAATCTTCAACGCGTTCCAATCCTACAACTCGGTTTCGCCGTTAGTGAAGTTCTCTCACTTCACCGCGAACCAAGCCATATTCCAAGCCCTAGAAGGCGAAGATTGCGTCCACATCATCGATCTCGATATCATGCAGGGACTTCAATGGCCAGGATTGTTCCACATCCTCGCATCGCGTTCCAAGAAGATCCGCTCAATGAGGATCACCGGTTTCGGATCCTCATCGGAGCTGTTAGAATCCACAGGGAGAAGACTCGCCGATTTCGCGAGTTCACTCGGTTTACCCTTCGAGTTTCAACCAGTTGAGGGTAAAATTGGAAGCGTAACGGAACTGAGTCAACTCGGCGTTAGGACTCACGAAGCAACCGTTGTTCACTGGATGCACCATTGTCTTTACGATATAACAGGGAGTGATTTAGGAACGTTGAGATTGCTGACTCAGCTGAGGCCAAAACTGATCACAACCGTTGAACAAGATCTGAGCCACGCTGGAAGCTTCCTCGCGCGGTTCGTAGAAGCTTTGCATTATTACAGCGCGTTGTTCGACGCGCTTGGGGATGGATTGGGTGCGGACAGCATAGAGAGGCATACTGTGGAGCATCAGTTACTGGGATGTGAGATTAGAAACATCGTGGCGGTTGGTGGGCCCAAGAGGAGTGGGGAAGTAAAAGTTGGAAGGTGGGGAGAGGAATTGAGACGGGTCGGGTTTCGACCCGTCTCACTTCGGGGTAACCCCGCTTCCCAAGCAAGTTTATTGCTTGGGATGTTCCCTTGGAGAGGGTATACCCTTGTGGAGGAAAATGGTTCACTCAAGCTTGGGTGGAAGGATTTGTCTCTGTTGACTGCCTCTGCTTGGCAACCGTCAGATTTGATTACTTATACTGATTGA 1359 0.5166 MLQSLVPRHSLSSNPNAISSMSTKRANRDDGDSPGEGPSFKRQNSGRNFPADKTVESAEGNEEEQIFEPEPQSHGESTGLKLLGLLLQCAECVAMDNLDFANDLLPEIAELSSPYGTSPERVGAYFAQALQARVVSSCLGTYTPLLTKSVILTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALEGEDCVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGRRLADFASSLGLPFEFQPVEGKIGSVTELSQLGVRTHEATVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSIERHTVEHQLLGCEIRNIVAVGGPKRSGEVKVGRWGEELRRVGFRPVSLRGNPASQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLTASAWQPSDLITYTD* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0117 452 MobiDBLite consensus disorder prediction 1 24 - -
Lan13g0117 452 MobiDBLite consensus disorder prediction 1 75 - -
Lan13g0117 452 Pfam GRAS domain family 84 443 IPR005202 -
Lan13g0117 452 PANTHER SCARECROW-LIKE PROTEIN 23 57 444 - -
Lan13g0117 452 ProSiteProfiles GRAS family profile. 73 443 IPR005202 -
Lan13g0117 452 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 57 444 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0117 Lan-Chr13 695796 698047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0117 47 446 GRAS Transcription Factor Family AT5G41920 67.160 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan13g0117 GRAS 6.1e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0117 - - gmx:100816249 744.577