Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0114 ATGTCATTTTCACCTAGCTTAGGATCTCCACAACCCTTGCTTAGAGATGCGAAATCCGAGGAAAGGGGTTTATGCTTGATCCATTTGTTGCTCACTTGTGGAAACCATGTTGCTAATGGTAACCTTGAAAATGCAAATATCATATTTGAGCAAATTTCCCTGCTTGCATCTCCTCATGGAGATACTATGCAGCGGATTGCAGCATATTTCACTGAAGCACTTGCCGATCGAATACTTAAGTCGTGGCCTGGGCTCCATAAAGCACTCAATTCAACTAGGATGACAATGATTTCTGAGGAAATTCTTGTTCAGAAGTTGTTCTATGAGCTTTTCCCTTTCTTGAAGTTAGCGTTTGTTTTGACAAATCAAGCTATAGTTGAAGCAATGGAAGGGGAGAAAATGATTCATATAATTGATCTCAATACTGCTGAACCTGCTCAATGGATTGCTCTATTCCAAGTTTTGAGTGCTCGGCCCGAAGGCCCTCCTCATTTGAGAATTACTAGTGTTCATCAGAAGAAAGAGATTCTGGATCAGATAGCTCATAAGCTGATCGAAGAAGCCGAAAAGTTGGATATACCATTCCAATTCAACCCTATAATCAGCAAATTAGAAAATCTCGATTTCGATAAACTTCGTGTAAAAACTGGTGAAGCACTTGCAATAAGTTCTATTCTCCAATTACATTCCTGTCTAGCCTTGGACAATGAAGCCATGCAGAGAAAATCTCCTCTTTTGTTAAACGGCGCCAACAAAATTCACCTGCAAAGAGTTCTGCCTATGAACCAAAGCACATTGGGTAATTTTCTTGAGAAAGATATGGTTAATAGTTATACCCCTAGTCCTGACTCAACTTCATCACCATTGTCTTTAACTACTTCAAATTCAATGAATGTGGAAAAGTTTCTTAATGCTTTAAGGGGATTATCACCAAAGGTCATAGTCGTAACTGAACAAGACTCCAATCATAATGGTTCGACTCTGATGGAGAGGCTGCTAGAATCACTATATACTTATGCAGCATTATTTGATTGCTTGGAATCCACTGCGTCGAGAACATCGTTGGAGAGATTAAGGGTGGAGAAGATGCTTTTTGGAGAGGAAATCAAGAACATTATTGCGTGCGAGGGAAGTGAAAGAAAGGAAAGACATGAAAAGCTGGATAAGTGGTTCAAGAGATTTGAATTAGCAGGGTTTGGTAATGTGCCTTTAAGCTATTTTGGTAAGTTGCAAGCAAGTAGGTTCATTCAAAGGTGTGGTTGTGAGGGATATAGAATGAGGGAGGAAAATGGTTGTGTACTAATTTGTTGGCAGGATAGGTCATTGTTTTCAATATCAGCTTGGAGATCTATGAAGTAA 1359 0.3944 MSFSPSLGSPQPLLRDAKSEERGLCLIHLLLTCGNHVANGNLENANIIFEQISLLASPHGDTMQRIAAYFTEALADRILKSWPGLHKALNSTRMTMISEEILVQKLFYELFPFLKLAFVLTNQAIVEAMEGEKMIHIIDLNTAEPAQWIALFQVLSARPEGPPHLRITSVHQKKEILDQIAHKLIEEAEKLDIPFQFNPIISKLENLDFDKLRVKTGEALAISSILQLHSCLALDNEAMQRKSPLLLNGANKIHLQRVLPMNQSTLGNFLEKDMVNSYTPSPDSTSSPLSLTTSNSMNVEKFLNALRGLSPKVIVVTEQDSNHNGSTLMERLLESLYTYAALFDCLESTASRTSLERLRVEKMLFGEEIKNIIACEGSERKERHEKLDKWFKRFELAGFGNVPLSYFGKLQASRFIQRCGCEGYRMREENGCVLICWQDRSLFSISAWRSMK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0114 452 ProSiteProfiles GRAS family profile. 17 449 IPR005202 -
Lan13g0114 452 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 242 IPR005202 -
Lan13g0114 452 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 267 351 IPR005202 -
Lan13g0114 452 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 356 451 IPR005202 -
Lan13g0114 452 PANTHER BNAA06G02820D PROTEIN 267 351 IPR030008 GO:0003700|GO:0005634|GO:0009739
Lan13g0114 452 PANTHER BNAA06G02820D PROTEIN 9 242 IPR030008 GO:0003700|GO:0005634|GO:0009739
Lan13g0114 452 PANTHER BNAA06G02820D PROTEIN 356 451 IPR030008 GO:0003700|GO:0005634|GO:0009739
Lan13g0114 452 Pfam GRAS domain family 26 449 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0114 Lan-Chr13 666141 668403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0114 9 452 GRAS Transcription Factor Family AT1G50420 64.811 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan13g0114 GRAS 1.2e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0114 - - gmx:100814131 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1880 8 25054984 25057212 Lan13g0114 13 666141 668403 LSH