Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0094 ATGGCATACATGTGTGCAGATAGTGGAAACCTTATGGCCATTGCTCAACAAGTCATTAACCAAAAACAACAACAAGAACAACAACAACACCAACAACATCAAAATCAACAAAACCAAACCCCTCCTCTTTCATGGAACAACAACAACAATAACAACAATAACAATACTCTACCTTTGTCTTTGTCTTCTTTACCTTTAGGGTATCCCTTAACTCCTCCCTCTGATTTCCCTGACCCTTTCCTTCAAGTCCCTGATGACCCTTCTTCATTCCACTTCCCTCCACCTCCTTTCAAATTCTCTGACTTTGATGATGATTGGATGGACTCTCTTATTCCCACTTCCGAAAACAACAACAACAACATTAACATTAACACTAACACTAACACTCACAATCACAATTCCGATTTTACCCTTCACCCTTCTCCCACCCTTCTCAACCGCGCCTTCTCTTCCTCTCCGCCACCACCGCCGCTACCGCCGTCGGTTGCTCTCCACGCCACCCAACCCCACTCCGCATCACACCCACTTCTCAATTCGCTGATAGACTGTGCTACTCTTATCGAATCTTGTTCGCCAGATCTTGCTTTACAATCACTTACCCAGTTAACGAAATCAGTGTCCCAACATGGAAACCCTATTCAGAGAGTGGCTTTCTACTTCGTTGAGGCTCTAACAATGAAATTTGATGAAAAAGATAGGAACTTGGTAACTGAGGTGACTCATACTCATTCTATTTCTGAAGAGTTAACACTGTGTTACAAGGCTTTGAATGATGCATGCCCTTATTCAAAGTTCGCTCATTTAACAGCTAATCAAGCTATTCTTGAAGCTACACAAGGTTCCAAACATATTCACATAGTTGATTTTGGAATTGTTCAAGGGATTCAATGGGCTGCTTTGTTACAAGCTTTTGCAACTCGTTCTTCTGGTAAGCCTCAAAGTGTAACCATTTCTGGGATTCCAGCTATGGCTCTTGGAACTTCACCTGTTAATTCTCTTGCTGCCACTGGGAACCGTTTATCTGAGTTTGCTAAGCTTTTGGGATTGAATTTTGAGTTTAGACCAATTCTTACACCTATTCATGAGCTCAATGAGAAAAGCTTTTGTGTGAAACCAAACGAAGCTTTGGCTGTTAACTTCATGCTTCAGTTGTATAATCTATTGGATGATGATCATGAAGGTGGTGATGCTCCTAATGCAGTTCAAACTGCACTGAATTTGGCCAAGTCTTTGAAGCCTAACATTGTTACTCTAGGAGAATATGAAGCTAGTTTAACAACCAGGGTTGGGTTTTTGAACAGATTCAAGGCTGCATTGAAGTATTTCTCTGCAGTGTTTGAGTCTCTTGATCCTAATTTGCCTGCAGATTTACCTGAGAGGTTACAGGTGGAAAGTCTTTTACTCGGGCGGCGAATTGCCGGTGTTGTTGGGTCTGAGGTTTCAGGGAGTGTGAGAGAAAGAATGGAGGATAAAGAGCAGTGGAGGGTGCTGATGGAAAGTGCTGGTTTTGAATCAGTGAGTCTCAGCCATTATGCAATTAGTCAGGCTAAGATTCTTCTATGGAATTATAGCTATAGCTCTCTGTATTCGCTTGTTGAATCTGAACCCGGGTTCTTGTCTCTGGCTTGGAAAGATGTTCCTCTGTTAACAGTTTCTTCATGGCGTTAA 1668 0.4215 MAYMCADSGNLMAIAQQVINQKQQQEQQQHQQHQNQQNQTPPLSWNNNNNNNNNNTLPLSLSSLPLGYPLTPPSDFPDPFLQVPDDPSSFHFPPPPFKFSDFDDDWMDSLIPTSENNNNNININTNTNTHNHNSDFTLHPSPTLLNRAFSSSPPPPPLPPSVALHATQPHSASHPLLNSLIDCATLIESCSPDLALQSLTQLTKSVSQHGNPIQRVAFYFVEALTMKFDEKDRNLVTEVTHTHSISEELTLCYKALNDACPYSKFAHLTANQAILEATQGSKHIHIVDFGIVQGIQWAALLQAFATRSSGKPQSVTISGIPAMALGTSPVNSLAATGNRLSEFAKLLGLNFEFRPILTPIHELNEKSFCVKPNEALAVNFMLQLYNLLDDDHEGGDAPNAVQTALNLAKSLKPNIVTLGEYEASLTTRVGFLNRFKAALKYFSAVFESLDPNLPADLPERLQVESLLLGRRIAGVVGSEVSGSVRERMEDKEQWRVLMESAGFESVSLSHYAISQAKILLWNYSYSSLYSLVESEPGFLSLAWKDVPLLTVSSWR* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0094 555 Coils Coil 19 39 - -
Lan13g0094 555 Pfam GRAS domain family 177 555 IPR005202 -
Lan13g0094 555 ProSiteProfiles GRAS family profile. 167 555 IPR005202 -
Lan13g0094 555 MobiDBLite consensus disorder prediction 22 60 - -
Lan13g0094 555 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 177 554 - -
Lan13g0094 555 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 177 554 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0094 Lan-Chr13 550555 552755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0094 1 555 GRAS Transcription Factor Family AT5G66770 51.136 4.27e-169 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan13g0094 GRAS 2.4e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0094 - - adu:107477343 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1904 8 25201529 25203710 Lan13g0094 13 550555 552755 LSH