LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan13g0063	ATGTCTCTATCTTCTTCTGTTACTATTAGTTCTCGCTTTCATGATTCAATCACTAAAAGTGCATTTCGCTCTTATCTCGCTGAGTTCATTTCCACTTTCTTCTTTGTCCTTCTTGTTGTTGGTTCTTCAATGTCTTCACGGAAAATGATGCCTGATGCTATATTGAACCCAACAAGTCTAGTAGTTGGTGCCATTGCAAATGCTTCTGCACTGTCTTCTGTTTTGTACATTGCATGGGACATATCAGGTGGACATGTTAACCCAGCAGTGACCTTTGCAATGGCAGTGGGAGGCCACATTAGTGTACCAACCGCTCTCTTCTACTGGGTTGCTCAATTGATAGCTTCTGTTATGGCTTGCCTTGTCCTCAAAGTCATTATTGTTGGAATGCATGTCCCAACATATGCAATTGCAGAAGAGATGACAGGGTTTGGAGCATCTGTGTTAGAAGGTGCCTTAACATTTGTTTTGGTGTACACTGTTTATGCTGCAAGGGACCCTAGGCGTGGTCCATTAAGTTCAATTGGCATACTTGTAATTGGCTTAACAGCTGGTGCAAGTGCCTTAGCCGCAGGTCCATTCTCTGGTGGCTCAATGAACCCTGCATGTGCTTTTGGGTCAGCAGCCATTGCTGGCAGTTTCAGGAATCAAGCAGTGTATTGGGTTGGACCATTGATTGGTGCAACTATTGCTGGTCTTCTTTATGACAATGCCATGTTCCCTTCTCATGCTACAGATCCAATTAGAGGAATTTCAGAAGGAATTGTAGTGTAA	774	0.4341	MSLSSSVTISSRFHDSITKSAFRSYLAEFISTFFFVLLVVGSSMSSRKMMPDAILNPTSLVVGAIANASALSSVLYIAWDISGGHVNPAVTFAMAVGGHISVPTALFYWVAQLIASVMACLVLKVIIVGMHVPTYAIAEEMTGFGASVLEGALTFVLVYTVYAARDPRRGPLSSIGILVIGLTAGASALAAGPFSGGSMNPACAFGSAAIAGSFRNQAVYWVGPLIGATIAGLLYDNAMFPSHATDPIRGISEGIVV*	258

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan13g0063	257	ProSitePatterns	MIP family signature.	85	93	IPR022357	-
	Lan13g0063	257	Pfam	Major intrinsic protein	19	235	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lan13g0063	257	Gene3D	Glycerol uptake facilitator protein.	6	248	IPR023271	-
	Lan13g0063	257	PRINTS	Major intrinsic protein family signature	23	42	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lan13g0063	257	PRINTS	Major intrinsic protein family signature	67	91	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lan13g0063	257	PRINTS	Major intrinsic protein family signature	104	123	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lan13g0063	257	PRINTS	Major intrinsic protein family signature	149	167	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lan13g0063	257	PRINTS	Major intrinsic protein family signature	181	203	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lan13g0063	257	PRINTS	Major intrinsic protein family signature	218	238	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lan13g0063	257	PANTHER	AQUAPORIN-8	8	256	IPR034294	-
	Lan13g0063	257	PANTHER	AQUAPORIN TIP5-1-RELATED	8	256	-	-
	Lan13g0063	257	SUPERFAMILY	Aquaporin-like	16	244	IPR023271	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan13g0063	Lan-Chr13	348312	350626	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan13g0063	8	254	Major Intrinsic Protein MIP	AT3G47440	63.968	3.16e-109	314

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan13g0063	K09873		-	gmx:100801448	412.535

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan13g0063	13	348312	350626	Lan13g0063	13	348312	350626	ECH