Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0059 ATGGCTAAGAAGAAAAGCTGGTTTGGTCTAGTGAAGAGGCTCTTTATATGGGACACACATTCAACACAAGATAAGGAGAAAAGAAGGAAATGGATGTTTGGAAGGGTAAAAAATAAGAGGCTACCTTCAATAACAGCACCACCATCAGAAGAGTTAAAAGAAACTACACTAAGTGAAGCAGAGGAAGAACAAAACAAGCATGCTTCAAAAGTGGCTATTGCTGATGCTGAGATTGTTAGGCTCACTAGCAGAAATGATGTTCCTCAGTGCCATAGGAAGATTCAAGAATCTGCAGCCATCAAAGTTCAAACTGCTTATAGGGGTTACCTAGCAAGAAAGGCTTTGAGAGCATTGAAGGGTATAGTGAAGCTTCAAGCTATAATTCGCGGTAGCGCGGTTCGACGCCAAGCTATGAGTACTTTGAAGTGCTTGCAGTCCATTGTGAATATCCAAACTAAGGTATGTGCAAGGAGACTCCAAATGGCTAAAGGAACATGTGATTGTGATGAAAATGAAGAGATGCAAAACTCAAAAGACAAGATAATAAGGATGGACTCAAACAGTGAAAGAAAGTGGGATGATAGCACTTTATTGAAGGAAGAAGTAGAAGCCTATTGCATAATCAAGAAAGAAGCAACTCTTAAGAGAGAAAGAATAAGAGAATACTCATTTAACCACAGAAGATCAGCTGAGTCAGAAAGAAATAAAGTACATGGAAGATGGAGATATTGGTTAGAGCAATGGGTAGATACACAACTTTCCAAAAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTCTAGAGGTGGAGAGGAATATGGAGTAAAACAACTTAAGCTGAGAAATCTTCAAAGACAAAACACATTTGAAGGATTAGATTCTCCAACACTTGCATCAAGAAAAGCTTTTTCTCATAGGAGGCAGTGTTCAATAGGAGAAGACCACTCATATTCAACTTCACCTGTAACTCCAGCATATATGGCTGCAACAGAATCAGCAAAAGCAAAATCAAGATCAACAAGCTCACCAAAAGTAAGGGCATGGAATTTGGACATGAACTATGATAATAGCTATTCACCATGCAAGAAAAAGCTATCTATTGTGCCTTCTACTAACATTGATCATCAACAAAGATCTCCAAGCTTAAAGGGTCTTTCAATGCCTATAAAATCTAGCAGGACTATAATGAAGGATCTTAGCATCAATTCAGATTTCTCACTCCCTTATTGGAATAACCAAAGTTCTTTCAAATGA 1263 0.3808 MAKKKSWFGLVKRLFIWDTHSTQDKEKRRKWMFGRVKNKRLPSITAPPSEELKETTLSEAEEEQNKHASKVAIADAEIVRLTSRNDVPQCHRKIQESAAIKVQTAYRGYLARKALRALKGIVKLQAIIRGSAVRRQAMSTLKCLQSIVNIQTKVCARRLQMAKGTCDCDENEEMQNSKDKIIRMDSNSERKWDDSTLLKEEVEAYCIIKKEATLKRERIREYSFNHRRSAESERNKVHGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRGGEEYGVKQLKLRNLQRQNTFEGLDSPTLASRKAFSHRRQCSIGEDHSYSTSPVTPAYMAATESAKAKSRSTSSPKVRAWNLDMNYDNSYSPCKKKLSIVPSTNIDHQQRSPSLKGLSMPIKSSRTIMKDLSINSDFSLPYWNNQSSFK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0059 420 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Lan13g0059 420 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Lan13g0059 420 PANTHER IQ-DOMAIN 11 5 406 - -
Lan13g0059 420 SMART iq_5 117 138 IPR000048 GO:0005515
Lan13g0059 420 SMART iq_5 94 116 IPR000048 GO:0005515
Lan13g0059 420 Gene3D - 93 146 - -
Lan13g0059 420 MobiDBLite consensus disorder prediction 42 66 - -
Lan13g0059 420 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Lan13g0059 420 PANTHER IQ-DOMAIN 5-RELATED 5 406 - -
Lan13g0059 420 Pfam Protein of unknown function (DUF4005) 319 383 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0059 Lan-Chr13 323797 326669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0059 1 420 IQD Protein Family AT5G13460 46.581 1.46e-111 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0059 - - lang:109325242 836.254