Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0055 ATGGCTTTGGAACTTGTGGGAGGAGCATTTTTGAATGCTGTGTTCGAAGTTTTGCTTGAAAAGATATCTTCTACTGAGGTGGTCAACTTCTTTAAGAAGGAGAAAATCAGTAACAAGTTGCTCAAGGATTTGAAACTTTCCTTATTGTCACTCACTGCTGTGCTCAATGATGCTGAAGAAAAGCATGTAGCAAATGCTTCTGTGAAGGAGTGGCTCAATGAACTTCAAGATCTTGCATTTGATGTTGATGACATGCTAGATGCTATCTATACTGATGCCAGGATTGCTGCAAATCAGGTACACACCATCAAAGCTGCTCCTTTGAAACACAACATTCTAGCCATTCTTGAAAGATTTGAATTTATCATAAAGCAGAAAGGTTTTCTTAATTTGGAAGTGGGTAAGAATCTGATGCTGCCAAAGAAGATACCATCATCTTCTTTGATAGAAGCATCTGATGTGTACGGTAGGGATAATGATAAAGAAGCTTTAATTAAACTTGTTTTATCAGATGATTCAAATGATAGCAATATAGCAGTGATTCCCATTGTAGGAATGGGTGGAATTGGAAAAACAACCTTAGCTCAACTCATATACAATGATTCTAGGGTGGAGACAGAATTTGATGTTAGAGCTTGGATATATGTCTCTGAAGAATTTGATGTTTGCAAAATTACTAAAACTCTTCTGGAGGTTGTCACTTCAAGAAATCTCGATATCAAAGATCTAAATTCTCTCCAACTTAATCTAAAGATGTGTTTAGCAAAGAAAAAGTTTTTATTTGTTCTTGACGATGTGTGGAATGAAAACTACATTAACTGGGACAGTATGAGAAGTCCATTCCAACTTGGCGCTCGAGGAAGTAAGATCATTGTAACAACACGTAGCATGCGTGTTGCGTCAATTATGCAAACTGCTTCACCTTATACTCTTGGAGAGCTGTCTAACAATGAATGTTGGAATTTGTTTTCAAGACATGCATTTGTCCGTGGTGATTTGATAATCGACTCTAATCTAGAAAGAATTGGAAAAGAAATAGTTCAAAAGTGCAAAGGGTTGCCCTTGGCTGTGAAGACATTGGCAGGAATTTTACGAGCCAAAGATGATAAGCAAGAATGGCTTAAAGTATTAAACAGTGAGATATGGGATTTGCAAGATCATGAGAGCAATATACTTCCAGCTTTGAGACTAAGTTATCATTATCTCCCTGCCAATTTGAAAAGATGTTTCGCTTATTGTGCAATATTTCCAAAAAATTATGAGTTTGAGAAGGAGAAGTTGATTTTGATGTGGATGGCAGAAGACTTGGTGCAGCAATCAAAAAGAAATGATAGAATTGAAGATGTTGGGGATGAGTACTTTAGTGAGTTTGTGTCCAGAACATTTTTTCAGCCATCAACACGAGATAAGTCATGTTATGTAATGCATGATCTTGTGAATGATTTAGCTAAGTTTGTATCTGGAACTTTTTTGGTCAGGTTGGAAGGCAAGAGTTGTAGTATGGTGGATGAACGAACTCGTTATTTGTCTCATATTATTGCGCATCCTCCTGTTTATGTAGATTCTGTTAGCAAAGCAACTCGCCTTCGCACACTTCTGCAGATGAGGTTGGTAGGTGGTACATCTCTGCATTTCTATGATGGCATACCACATCAATTGTTGATTGAGTTAAGATGTTTGAGAGTGTTATCTTTGGCAGGTGCGTCTATTTATACATTGCCAATATCAATTGGGAAACTAAAACATTTACGCTATCTGGATTTTTCTGGCACTGAGATATACGAGCTACCTGAATCTGTGGCTGAATTATACAATTTACAAACCCTGAAAGTCGCAGGATGTTGCAATCTTGACAAACTGCCTAGCTTGATGTCTTGTCTTGTTGACTTGCGTTACTTGGATATCTCAGGCATTTTCTTAAGGAGAATGCCTTCGGAAATGAGTAAATTAAGCAGCCTCCAGATGTTGAGTGATTATTTCGTAGGAGTTGAATACGGATGTTCCGTTGGTCAATTGGGACCACTATCCGGTTTACGTGGATCGTTGTTCATCCATAACTTAAAACTTGTTGCAAATTGTAATGATTCTAATGAGGCCAAGTTGAAGGAGAAGATATTTCTTAGGAAGTTAACATTGGATTGGAGTGGAAATGGTAATACTGATAACTCACAGCATGAGAAAGATATATTGGAGAGCCTACAGCCACATACAAATTTAAAGGAGCTTGTTATTTATAACTATCCCGGCACAGGATTTCCAAAATGGTTGGGAGGCTATTCCTCATTCAACTTGGTATCTTTAGAGCTTAAAGGTTGTAAATACTGCTACCAACTACCTCCACTCGGACAACTTCCTTCCTTGAGAGAGCTTTCGATTATTAAATTTGATGGGTTGGAAGGCGTACTCGCCGAGTTTTATGGCAACGGAACTTACTCTTCTGATGTTGCAATTGTGTACTTTCCTGCACTAGAAACTTTGAGATTTGAGCACATGCCGATGTGGGAAGAATGGTTGCCAGGTCCTGATAATAATGGTCATACCGCATTTCCTCGTCTTAGAGAGCTTCATATTGAGAGCTGTCCTAGCCTTAAAGGGGTCTTACCTGCTACCCTTCCATCTTTAACAATACTTACAATCAGGGAGTGCAAGAATCTCCTTTGTTCACTTCCATTGTCTCCATTGTTGCACACACTAATCATTCAGAACTGTGGGGATCTAGACTTGCCAGCAACCGCCCCCGAGTGCTATCAGTCTCTAACTTCATTTCACTTACACAATAGTTGTGACTCACTTGAGTTCTTGTCACTAAATCTGTTCCCTGGTCTCAAGTCTCTAGATGTTTCAAGTTGCAAGAATTTGGAAGCACTCACAATTTCAGTGTCAGAGGATACTCCTTCTTTACTTACTTCCTTGCGTTCCTTGTGCATTAGTCATTGTCCAAAATTGTTACATTTTTCCATGGAAGGATTTGAATCCCTGAATCTCACTTTGTTGATCATCAATAACTGCCAGAAGTTAACATCACTACCTGCAGATATGAATCACTGTATGCCAAACTTGAAGGCACTTCGGCTGTCAAATTGTCCCGATATTAAATGGACTCCGGATATGGGTTGGCTTCATAAGTTAACATCCATCAGCATTCAGAATTGCAACAAATTCATGCAAGGAAAATTGGAGTGGAATGCATCAAATCTTACAGCTCTTAGTGACTTGACCAGGCTCAAGCTACCAAGTTTGAGCCCTGAAACAGCCAAGCCTCAAAATTCTCGTTGGATTCCAGTTTCGATGGGAAATCGTAGAATTGCGCCTCAAATATATCAATGGCGTCCACATACTCAAAACTGA 3348 0.3898 MALELVGGAFLNAVFEVLLEKISSTEVVNFFKKEKISNKLLKDLKLSLLSLTAVLNDAEEKHVANASVKEWLNELQDLAFDVDDMLDAIYTDARIAANQVHTIKAAPLKHNILAILERFEFIIKQKGFLNLEVGKNLMLPKKIPSSSLIEASDVYGRDNDKEALIKLVLSDDSNDSNIAVIPIVGMGGIGKTTLAQLIYNDSRVETEFDVRAWIYVSEEFDVCKITKTLLEVVTSRNLDIKDLNSLQLNLKMCLAKKKFLFVLDDVWNENYINWDSMRSPFQLGARGSKIIVTTRSMRVASIMQTASPYTLGELSNNECWNLFSRHAFVRGDLIIDSNLERIGKEIVQKCKGLPLAVKTLAGILRAKDDKQEWLKVLNSEIWDLQDHESNILPALRLSYHYLPANLKRCFAYCAIFPKNYEFEKEKLILMWMAEDLVQQSKRNDRIEDVGDEYFSEFVSRTFFQPSTRDKSCYVMHDLVNDLAKFVSGTFLVRLEGKSCSMVDERTRYLSHIIAHPPVYVDSVSKATRLRTLLQMRLVGGTSLHFYDGIPHQLLIELRCLRVLSLAGASIYTLPISIGKLKHLRYLDFSGTEIYELPESVAELYNLQTLKVAGCCNLDKLPSLMSCLVDLRYLDISGIFLRRMPSEMSKLSSLQMLSDYFVGVEYGCSVGQLGPLSGLRGSLFIHNLKLVANCNDSNEAKLKEKIFLRKLTLDWSGNGNTDNSQHEKDILESLQPHTNLKELVIYNYPGTGFPKWLGGYSSFNLVSLELKGCKYCYQLPPLGQLPSLRELSIIKFDGLEGVLAEFYGNGTYSSDVAIVYFPALETLRFEHMPMWEEWLPGPDNNGHTAFPRLRELHIESCPSLKGVLPATLPSLTILTIRECKNLLCSLPLSPLLHTLIIQNCGDLDLPATAPECYQSLTSFHLHNSCDSLEFLSLNLFPGLKSLDVSSCKNLEALTISVSEDTPSLLTSLRSLCISHCPKLLHFSMEGFESLNLTLLIINNCQKLTSLPADMNHCMPNLKALRLSNCPDIKWTPDMGWLHKLTSISIQNCNKFMQGKLEWNASNLTALSDLTRLKLPSLSPETAKPQNSRWIPVSMGNRRIAPQIYQWRPHTQN* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0055 1115 Gene3D - 313 397 IPR042197 -
Lan13g0055 1115 SUPERFAMILY L domain-like 468 988 - -
Lan13g0055 1115 Coils Coil 41 61 - -
Lan13g0055 1115 Gene3D - 15 125 - -
Lan13g0055 1115 Pfam NB-ARC domain 160 379 IPR002182 GO:0043531
Lan13g0055 1115 Gene3D - 398 485 IPR036388 -
Lan13g0055 1115 Gene3D Ribonuclease Inhibitor 890 1089 IPR032675 -
Lan13g0055 1115 PRINTS Disease resistance protein signature 180 195 - -
Lan13g0055 1115 PRINTS Disease resistance protein signature 253 267 - -
Lan13g0055 1115 PRINTS Disease resistance protein signature 350 364 - -
Lan13g0055 1115 PRINTS Disease resistance protein signature 937 953 - -
Lan13g0055 1115 Gene3D Ribonuclease Inhibitor 521 889 IPR032675 -
Lan13g0055 1115 SUPERFAMILY L domain-like 939 1067 - -
Lan13g0055 1115 Gene3D - 135 308 IPR027417 -
Lan13g0055 1115 CDD AAA 155 266 - -
Lan13g0055 1115 PANTHER DISEASE RESISTANCE PROTEIN RP 26 983 IPR044974 GO:0006952
Lan13g0055 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 413 IPR027417 -
Lan13g0055 1115 PANTHER OS05G0414200 PROTEIN 26 983 - -
Lan13g0055 1115 Pfam Rx N-terminal domain 10 93 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0055 Lan-Chr13 288687 292569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0055 177 417 WRKY Transcription Factor Family AT5G45050 25.000 5.11e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0055 - - ccaj:109812375 1230.31