Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0053 ATGGGGTATGTCTACCTTTCTTGCAAAGCTGAATCCACCGTCTCAACCTCAAATTCTCTCTCTCAATCTTCAAAACAGAACAAAGACAAAACCATCAACATCCAACACTTCCACTACAGTGACCTTGAAGCTGCAACCAATGGCTTCTCAGAACAAATGCTCCTTGGCAAAGGAAGCCATGGATATGTCTACAAAGCTATTCTTAGTGGAAAACATGTTGCAGTTAAAAGATCTTCTACGCATCATTCTATTCATCCACCAAGACCACACACCAATTATTCAACTTCTCATTCAATCACAAATGAACTTGACAATGAGATTGAAATTTTGTCCAAAATTCAAAGCCCAAGATTGGTCAACTTAGTTGGTTTCACAAATGATTCAAAAGATAGACTCTTGGTGGTTGAGTTTATGAGCAATGGAACACTCTATGATGTTCTTCATTCATCATCAAATAAGTCAAAAATACCATGTTGGGGTAGGAGAATTCGTTTTGCTTTGGAAACTGCTAAAGCTATTGATACCCTTCATTCTTCAACACCACCAGTGATTCATAGAGATATCAAATCAGCAAATGTTCTCATTGATCAAAACTACAATGCAAGGTTAGGTGATTTTGGTTTAGCTTTAAGGGGCCATGTTGATGATTATAGACTAAGGTTTACTCCACCTGCTGGTACAATGGGATACCTTGATCCTTGTTATGTGACTCCTGATAATTTAAGCACTAAGAATGATGTGTTTAGTTTTGGTATTTTGTTGTTAGAGATTATAAGTGGAAGAAAAGCTATTGATGTTACTTACTCACCACCTTCTATTGTGGATTGGGCTATTCCTCTTATCAAAAGAGGGAAGCTTTTGTGTGTTTATGATCCTAGGATTCCACCACCCAAGAATCCTATTGTGAGAAAACAATTGGCAGTTATTGCAGCAAAGTGTGTTAGGTCTTGTAGGGAGAGAAGGCCTTCAATGAATGAGATTGTTAATTGGCTTTGTGGTTTGTGTAAATTGATGCCTCTTCATTCGTGGAACGGTTTTAATATTAATAATCCTTGTATGATGGTTGAGCCTGTTGGAAGGCCAATTGAAGCAGGAAATAATGCTGCACAAGCACAATGGAGTTCAAGATTGGAAGGCATGGTAGAAGGAGGAAATAACCTTGATGCTGTGGATGCAAAACTGTCTAAATCTGCGACGAGATATTCGCGGAGGGTGTATTCTGATTTAGGGTTGAGTAATAACTTGATGGATCTTATGGCTGCCACTGAGGATAATGACTTTGTGAGAGATGTTGATGGAGTGGAACATGGTTCTAAGTCAGGCAAAAAAGTTTCTTCTAGCACAAGGTTTGGCAGTGGAAGATATTTCACAAAGGGTAGCACTAGACATCTTTATCGTCCTTGTCGTAGCGATAAGGACACGTTTGTTTTGAGTAAAGGCCAAATTATTGATGAATCCGAGACTTTAAAACATGAGAATGGAGTTTGTGGTTTGAAGTTGAATTCTATGGAAGCTGAAGTAATAGTGTAA 1530 0.3843 MGYVYLSCKAESTVSTSNSLSQSSKQNKDKTINIQHFHYSDLEAATNGFSEQMLLGKGSHGYVYKAILSGKHVAVKRSSTHHSIHPPRPHTNYSTSHSITNELDNEIEILSKIQSPRLVNLVGFTNDSKDRLLVVEFMSNGTLYDVLHSSSNKSKIPCWGRRIRFALETAKAIDTLHSSTPPVIHRDIKSANVLIDQNYNARLGDFGLALRGHVDDYRLRFTPPAGTMGYLDPCYVTPDNLSTKNDVFSFGILLLEIISGRKAIDVTYSPPSIVDWAIPLIKRGKLLCVYDPRIPPPKNPIVRKQLAVIAAKCVRSCRERRPSMNEIVNWLCGLCKLMPLHSWNGFNINNPCMMVEPVGRPIEAGNNAAQAQWSSRLEGMVEGGNNLDAVDAKLSKSATRYSRRVYSDLGLSNNLMDLMAATEDNDFVRDVDGVEHGSKSGKKVSSSTRFGSGRYFTKGSTRHLYRPCRSDKDTFVLSKGQIIDESETLKHENGVCGLKLNSMEAEVIV* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0053 509 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 5 466 - -
Lan13g0053 509 PANTHER OS01G0750732 PROTEIN 5 466 - -
Lan13g0053 509 Gene3D Transferase(Phosphotransferase) domain 1 138 339 - -
Lan13g0053 509 Pfam Protein kinase domain 50 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0053 509 ProSiteProfiles Protein kinase domain profile. 49 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0053 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lan13g0053 509 SUPERFAMILY Protein kinase-like (PK-like) 31 341 IPR011009 -
Lan13g0053 509 SMART serkin_6 49 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0053 509 Gene3D Phosphorylase Kinase; domain 1 19 137 - -
Lan13g0053 509 ProSitePatterns Protein kinases ATP-binding region signature. 55 76 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0053 Lan-Chr13 281276 283256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0053 37 331 Receptor kinase-like Gene Family AT3G59420 43.289 2.23e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lan13g0053 Pkinase 8.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0053 - - gmx:100819674 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0019 7 100091 101996 Lan13g0053 13 281276 283256 LSH