Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0042 ATGGACGAAATTCATGAGCCTCATACCCGTGAAGATGCAAATGAGAATGAAGTGATTACTGAAAGTTCTTCTTTTGTTAAAGGGGAAACATCACTTGAACTGAGTAACCCACCAAAAGTTGATTCACAAGTTGAAATCCTTCATGACAAGGTCACCAAACAAATCATCAAAGAAGGTCATGGCCACAACAAACCTACCAAGTATTCAACCTGCTTTTTCCATTACAGGGCATGGTCTGAAGGCACACAACACAAGTTTGAAGACACATGGCAGGAGCAACGTCCAATTGAGATGGTGTTGGGAAAAGAGAAGAAAGAAATGACCGGCTTGAGCATTGGTGTGGCGAGTATGAAAGCTGGTGAACGTGCTTTGCTGCATGTGGGCTGGGAATTAGGATATGGGAAGGAAGGAAGCTTTTCTTTTCCTAATGTTCCACCCATGGCAGATTTAGTTTATGAAGTTGAACTCATTGGCTTTGATCCAACAAAAGAAGGAAAAGCTCGCAGTGATATGACAGTGGAGGAAAGGATTGGTGCAGCGGATCAGAGAAAAGTGGATGGAAATGCTTTATTTAAAGAAGAAAAACTAGAAGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGGGATATGGCTTTGGCTGTAAAGAATCCATGTCATCTTAACACGGCAGCATGTCTGATTAAGCTGGACCGTTATGAAGAAGCTATAGGACAATGCACCATTGTGCTAAGTGAGGATGAAAACAATGTGAAGGCATTATTTAGAAGAGGTAAGAGTAGAGCAGCACTTGGGCAAACAGATGCTGCCAGGGAAGATTTTCTAAAAGCTCGGAAGCACGCTCCTGAGGATAAAGCTATCGCAAGAGAATTGAGGTTGCTTGCTGAGCACGACAAAGTTATTCACCAAAAGCAGAAAGAGTTATATAAAGGAATATTTGGACCAAGACCAGAGCCAAAACCTAAGCCAAGTAATTGGCTCATTCTTATCTGGCACTCTTTGCTTTCTGTATTTTATCGCCTTATTGCACTCTTCAAGCGCGAAACCCACAAATCTGATTAA 1104 0.4185 MDEIHEPHTREDANENEVITESSSFVKGETSLELSNPPKVDSQVEILHDKVTKQIIKEGHGHNKPTKYSTCFFHYRAWSEGTQHKFEDTWQEQRPIEMVLGKEKKEMTGLSIGVASMKAGERALLHVGWELGYGKEGSFSFPNVPPMADLVYEVELIGFDPTKEGKARSDMTVEERIGAADQRKVDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLIKLDRYEEAIGQCTIVLSEDENNVKALFRRGKSRAALGQTDAAREDFLKARKHAPEDKAIARELRLLAEHDKVIHQKQKELYKGIFGPRPEPKPKPSNWLILIWHSLLSVFYRLIALFKRETHKSD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0042 367 Gene3D - 35 160 IPR046357 GO:0003755
Lan13g0042 367 SUPERFAMILY FKBP-like 41 166 - -
Lan13g0042 367 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 68 160 IPR001179 GO:0003755
Lan13g0042 367 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 28 328 - -
Lan13g0042 367 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 28 328 - -
Lan13g0042 367 MobiDBLite consensus disorder prediction 18 38 - -
Lan13g0042 367 ProSiteProfiles TPR repeat profile. 265 298 IPR019734 GO:0005515
Lan13g0042 367 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 63 157 IPR001179 GO:0003755
Lan13g0042 367 SUPERFAMILY TPR-like 172 325 IPR011990 GO:0005515
Lan13g0042 367 MobiDBLite consensus disorder prediction 1 17 - -
Lan13g0042 367 MobiDBLite consensus disorder prediction 1 39 - -
Lan13g0042 367 Gene3D Tetratricopeptide repeat domain 161 293 IPR011990 GO:0005515
Lan13g0042 367 SMART tpr_5 265 298 IPR019734 GO:0005515
Lan13g0042 367 SMART tpr_5 231 264 IPR019734 GO:0005515
Lan13g0042 367 SMART tpr_5 180 213 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0042 49 327 Calmodulin-binding Proteins AT3G25230 32.740 1.45e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0042 - - aprc:113865048 628.246