Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0040 ATGGCATTTCACATAGCATGTCCAATTACATGTCGCCGAATCTGTTTCTGCGTGTCAGTGTTTCCACGCTCTCTTCACAACAATGCATTTCTCAACGATGTCACCGCGCTTCGTCAATTCCTCTCCTCCGATACTACCACCTACACCTCCACCTCCACCGTCCAGGTCGCCGTGCCCAAGGTCCTCCCTCCACCTCCGAATCTGAATCCGAATCCGGCGCCAGATGGAGGACTTCCACCTTGTGCTGATGCTGCTGCTATGGATGAGTCTGCATCGATGAAGGCCAAACGTATTGCTCTGCAGAGAAAAGGCACTGCCACTATGCTTGCTGCTGAAGATTATGCTCGCCGGTTAGAGTCCGGTGGTTGTGGTGACATTGCGAAACAGGATACATCTGGAAATCTTGATGGAGAAGAACAGGGTCAACCTAACCTGAAAGTCTTTTGTCGAATGTGCAATCGTGTTGAAAATGAAGGAACTGAGAGGGCAAAAAAGATGTTATCGTGTAAAAGTTGTAGTAAGAAATACCATAGGAACTGCTTGAGAAGTTGGGCTCAAAATAGAGATTTATTTCATTGGAGTTCATGGACCTGCCGTGCTTGCCGAATTTGCGAGGCTTGCAGAAGGACTGGTGATCCAAGTAAGTTTATGTTTTGCAAAAGGTGTGACGGTGCTTACCATTGTTATTGTCTTCAGCCTCCTCACAAGAATGCTAGTAATGGGCCCTATTTGTGCCCAAAGCATACAAAATGTCACAGTTGCGGATCCAATGTTCCTGGAAATGGACTAAGTGTGAGGTGGTTTCTGGGATACACCTGTTGCGATGCTTGTGGAAGATTGTTTGTGAAAGGAAACTACTGCCCTGTTTGTTTGAAGGTTTACAGAGATTCAGAGTCGACACCAATGATTTGCTGTGATGTTTGCCAGCGCTGGGTTCATTGCCATTGTGATGATATCAGTGATGAAAAATATCATCAATTTCAAGTGGATGGGAATCTGCAGTATAAATGCCCCACATGTCGTGGGGAATGTCATGAGATCCAAGGTCTTGAGGATGCTGTGCAAGAGCTTTGGAGGAGAAGGAATATTGCTGATAAAGATTCAATTGTAAGCTTGAGGGCTGCAGCTGGTTTACCAACTCAGGATGAAATATTTTCTATTTCACCATTTTCAGACGATGAGGATGCTGGTGGTGGGCCTTTGAAGTTTAAGAGTGAATCTGGGCGTTCCTTTAAGTTCTCTCTGAAGAATTTGTCCAATGACACGCCAAAGAAGAAAAATTATGCAAATAAATCTTCAAGTAAAAAGACTACCAAGAAAAAGGACTCTCAGTCATTTGTGTCTGGTAAAACTGACACACACCATAGTCTTGAAGCACATAGTGATGCCAGATCTTTACATAGCTTGGATAATGATGATATACAATCCCTGAGAAGTGATGTTTATTCATCACCTGTGGCTGGAAGCCAGTTTCAAACCGATATGTCTTGCCATATCAATCAGCCAAGAGTTTTGAAACATAAGTTTGTTGATGAGGTCGTCAGTGATGAAGAGAAGAGACCTAGAGTTGTTCGAATCAAAAGCAATAAGACACATATTAAGAATGGCGATGAGGTGAGCGGAAAACATGGTGATAAGACTCAGAATGTGAAGGGGAAGAAGTTGGTTATAAACTTGGGTGCACGGAAAATTGATGTGGCTAGTTCTCCATGGTCTGACACAAGCTGCCAAAGAGATCAAGATCTGGTTACTGTTAATGGAAATGAATATATAAGCCAATTGAGGAATGGAGATAGGTTTGCATTAGATAGACACAATGACACAGGAAACAGAGTTGACTCTGGCCAATCAAAATTTTTAAAGGTTTTTGGAAGGGAAAGAAATTTGATTAAATTGGGGAAAGTTAAGCCAGAAGTTTCTGAGTTCAACACAGCCTCTGGTAGAGGTAATATTTCTGATGGAAGTTTAGAGGGCACTCATGCCTTGCGGAGCAAATGTAGTACTAATGGAATATTTGATCAAGTCGGAAGAGTAGAAGCTATTTCAAGTGGTGAAAGGATGACATATCTGGGGAAGCAGTCAGAACACAGCTCCGATGATGAGACAGATGACAATCATAATCTTGCACCCTCACATTCTTTGCCAAAAGATTCTAAACCTCTACTGAGATTTAAATTGAAGAAATCTAGCATTGAAAGTCTAAATTCTCCTCACCTGGATGAGGAGAAGACTATAATCAAGGGCCAGAGGTCAAAAAGGAAGAGGCCAACACCCTTTAAGGAGAAAAAGTTGTTTTATGTGACTGAAAATGTAAACCAATCACATCAAGACAGTCCAATGGATGAGATCATGGCTGCAAACTGGATATTGATGAAATTGGGTAATGATGCAGTTGGAAAGAGAGTCGAAGTTCATCAGCCATCTGACAATTCTTGGCACAAGGGAGTGGTTACTGACACAGTGGAAGGCACTTCGAAGATACATGTTACCTTAGATGATCGGAAGGTGAAGACGCTGGAACTCAGTAAGCAGGGGGTCCGTTTTGTTCCACAAAAGCAGAAGAGATCGAAGGCATGA 2577 0.4276 MAFHIACPITCRRICFCVSVFPRSLHNNAFLNDVTALRQFLSSDTTTYTSTSTVQVAVPKVLPPPPNLNPNPAPDGGLPPCADAAAMDESASMKAKRIALQRKGTATMLAAEDYARRLESGGCGDIAKQDTSGNLDGEEQGQPNLKVFCRMCNRVENEGTERAKKMLSCKSCSKKYHRNCLRSWAQNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNASNGPYLCPKHTKCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMICCDVCQRWVHCHCDDISDEKYHQFQVDGNLQYKCPTCRGECHEIQGLEDAVQELWRRRNIADKDSIVSLRAAAGLPTQDEIFSISPFSDDEDAGGGPLKFKSESGRSFKFSLKNLSNDTPKKKNYANKSSSKKTTKKKDSQSFVSGKTDTHHSLEAHSDARSLHSLDNDDIQSLRSDVYSSPVAGSQFQTDMSCHINQPRVLKHKFVDEVVSDEEKRPRVVRIKSNKTHIKNGDEVSGKHGDKTQNVKGKKLVINLGARKIDVASSPWSDTSCQRDQDLVTVNGNEYISQLRNGDRFALDRHNDTGNRVDSGQSKFLKVFGRERNLIKLGKVKPEVSEFNTASGRGNISDGSLEGTHALRSKCSTNGIFDQVGRVEAISSGERMTYLGKQSEHSSDDETDDNHNLAPSHSLPKDSKPLLRFKLKKSSIESLNSPHLDEEKTIIKGQRSKRKRPTPFKEKKLFYVTENVNQSHQDSPMDEIMAANWILMKLGNDAVGKRVEVHQPSDNSWHKGVVTDTVEGTSKIHVTLDDRKVKTLELSKQGVRFVPQKQKRSKA* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0040 858 MobiDBLite consensus disorder prediction 414 467 - -
Lan13g0040 858 SUPERFAMILY FYVE/PHD zinc finger 193 254 IPR011011 -
Lan13g0040 858 SUPERFAMILY FYVE/PHD zinc finger 284 343 IPR011011 -
Lan13g0040 858 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 281 343 IPR013083 -
Lan13g0040 858 MobiDBLite consensus disorder prediction 435 467 - -
Lan13g0040 858 ProSitePatterns Zinc finger PHD-type signature. 149 201 IPR019786 -
Lan13g0040 858 SUPERFAMILY FYVE/PHD zinc finger 138 204 IPR011011 -
Lan13g0040 858 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 258 IPR013083 -
Lan13g0040 858 PANTHER PHD FINGER FAMILY PROTEIN 2 852 - -
Lan13g0040 858 SMART PHD_3 148 202 IPR001965 -
Lan13g0040 858 SMART PHD_3 286 341 IPR001965 -
Lan13g0040 858 SMART PHD_3 203 249 IPR001965 -
Lan13g0040 858 MobiDBLite consensus disorder prediction 691 720 - -
Lan13g0040 858 MobiDBLite consensus disorder prediction 692 707 - -
Lan13g0040 858 ProSiteProfiles Zinc finger PHD-type profile. 146 204 IPR019787 -
Lan13g0040 858 PANTHER HISTONE ACETYLTRANSFERASE 2 852 - -
Lan13g0040 858 ProSiteProfiles Zinc finger PHD-type profile. 284 343 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0040 Lan-Chr13 204672 211011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0040 - - gmx:100815407 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1936 8 25381481 25390492 Lan13g0040 13 204672 211011 LSH