Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0034 ATGAATACACTTTCTCATGTTCCCCCGGGTTTTAGATTCCATCCCACAGATGAAGAACTTGTTGATTACTACCTTAGGAGAAAAGTAACTTCAAGAAGGATTGACCTTGATATCATAAAAGATGTTGATCTCTACAAAATTGAGCCATGGGATCTTCAAGAGCTATGCAGAATAGGAACAGAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACAGGAACTCGCACAAATAGAGCAACAGTAGCAGGATTTTGGAAAGCAACTGGAAGAGACAAAGCCATATATTCAAAACACAACCTTGTAGGGATGAGGAAAACTTTGGTCTTTTATAAAGGTCGAGCTCCTAATGGACAAAAATCAGATTGGATAATGCATGAATATCGCCTTGAAACTGATGAAAATGGTTCATCCCAGGAAGAGGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACAACAAGCATGCGTAAAGTGAGTGAACATGATTCACCTTGTTGGTACGATGACCAAGTTTGTTTCATGCAAGATTTGGACTCACCAAGGCAAATTACCTCTAAACCTAATAACTTACTCTACCAAATCCCATATAATAATAATAATAACAATAATAATCCTTGCAAGAAAGAGTTAGATTTGCCATATCATTTGTCACGTGATCAATTTCTCCAGCTTCCACTTCTAGAGAGTCCAAAACTTGTTCAATCTTCTTCCACTATAAGTGCCTCTAATCCTATGGCAACATTACTCATGCAAGAAGAACAACAAGTTCAACAACAAAACTTTCATGCAATGTATGGCAACAATAACATTAATGTTGAACAAGGGGGAGTTGATCAAGTCACTGATTGGCGCGTGCTAGACAAGTTTGTTGCTTCACAACTTAGCCATGATAATGCATCATCGTCCAGAGATAACAATAACAACTTTCATGGGACGGATATTAATAGCAATGTGCATTTGGAGAAGCAGGAAATGGTGCCTCAAAACAATGCCTCAACATCAAACTCCACTTGTCCAATTCATTTGTGGAAATAG 1059 0.3787 MNTLSHVPPGFRFHPTDEELVDYYLRRKVTSRRIDLDIIKDVDLYKIEPWDLQELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIYSKHNLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGSSQEEGWVVCRVFKKRVTTTSMRKVSEHDSPCWYDDQVCFMQDLDSPRQITSKPNNLLYQIPYNNNNNNNNPCKKELDLPYHLSRDQFLQLPLLESPKLVQSSSTISASNPMATLLMQEEQQVQQQNFHAMYGNNNINVEQGGVDQVTDWRVLDKFVASQLSHDNASSSRDNNNNFHGTDINSNVHLEKQEMVPQNNASTSNSTCPIHLWK* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0034 352 MobiDBLite consensus disorder prediction 302 322 - -
Lan13g0034 352 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Lan13g0034 352 MobiDBLite consensus disorder prediction 333 352 - -
Lan13g0034 352 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Lan13g0034 352 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Lan13g0034 352 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 340 - -
Lan13g0034 352 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 340 - -
Lan13g0034 352 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0034 Lan-Chr13 167469 171407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0034 1 350 NAC Transcription Factor Family AT1G62700 52.475 2.35e-131 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan13g0034 NAM 3.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0034 - - gmx:100809525 510.76