Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0026 ATGAATACTCGTGTTACAAGAGATTCAATGTGTTCATCCCATAATCTGTTGAGAATAAGTTTATCTCTCATATTCATCTCAACCCTTGTGCACATAGCATCTGCATCAAATTCTACATCAACCAAATCCATCAATAATAGCTACAAAAGGTTTATAAAAGTGAAGTGCAACTCAACCACTTACCCAAGTTATTGCTACAAGTCTCTCTCCCCTTATGCATCAACAATCAAAACAAACACTCTCACACTCACAAAACTCTCTATCCATGTGGCTCTAAAAGCAGCCAAAAACGTTTCTTTAACATTGAAAAAGCTATCAAAAGCCAAGGGGAACTTAAGTCATGCAGAGACAGAGTTAATTGCTGATTGCAAAGAGAACATTGGTGACAGTGTGGATCTGCTTCAACAATCTGCTGATGGGTTGAAAGATTTGAATGGTACGAGTACATATGAAGAGAGGTTTGAATGGGATACCATAAAGACATGGATGAGTGCTTCAATAACAGATGTGGGTACTTGCAGTGATGAGTTTGATGAACTCAAAGTCAGGGCTTCAATTCAGAAGAAGATCAAACCTGCTATTGCTCATCTTGCTTGGTTCAATAGCATTGCCCTTGCTCTAGTCAATAGACTTTCCTACTAA 642 0.3832 MNTRVTRDSMCSSHNLLRISLSLIFISTLVHIASASNSTSTKSINNSYKRFIKVKCNSTTYPSYCYKSLSPYASTIKTNTLTLTKLSIHVALKAAKNVSLTLKKLSKAKGNLSHAETELIADCKENIGDSVDLLQQSADGLKDLNGTSTYEERFEWDTIKTWMSASITDVGTCSDEFDELKVRASIQKKIKPAIAHLAWFNSIALALVNRLSY* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0026 213 Pfam Plant invertase/pectin methylesterase inhibitor 51 207 IPR006501 GO:0004857
Lan13g0026 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 211 IPR035513 -
Lan13g0026 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 211 IPR006501 GO:0004857
Lan13g0026 213 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 9 211 - -
Lan13g0026 213 SMART PMEI_2 47 207 IPR006501 GO:0004857
Lan13g0026 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 212 IPR035513 -
Lan13g0026 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 211 - -
Lan13g0026 213 CDD PMEI-like_3 56 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0026 Lan-Chr13 131354 132044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0026 52 211 Carbohydrate Esterase AT1G53840 30.588 1.17e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0026 - - gmx:100776299 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0026 13 131354 132044 Lan13g0026 13 131354 132044 ECH