Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0020 ATGGCTTCTTCTAATGGTGGTGTGCCACCCGGGTTTAGATTTCATCCCACGGATGAAGAGCTGCTTCATTACTACTTGAAGAAGAAAGTCTCCTTTCAAAAGTTTGACATGGATGTTATTAGAGAGGTCGACTTGAACAAGATGGAACCTTGGGACTTGCAAGAAAGATGTAAAATTGGTTCAACTCCACAAAATGAGTGGTATTTCTTTAGTCACAAGGATAAAAAGTACCCAACAGGATCAAGGACAAATAGAGCAACAAATGCTGGATTTTGGAAAGCAACGGGAAGAGATAAGTGCATTAGGAATACATACAAAAAGATTGGAATGAGGAAAACACTTGTGTTCTATAAAGGTAGAGCTCCTCATGGACAAAAGAGTGATTGGATTATGCATGAGTACCGCCTTGAAGATAGCAATGACCCTCAAGCAAATAACAATGAAGAGGGATGGGTGGTGTGCAGGGTGTTCAAGAAGAAGAACCTATTTAAGGTTGGAAATGAAGGTGGTTCCACACAACAACTGAACAATAACTCTTCATCAGACACCAATGCTCGCTCCTTCATGCATCGAGATAATAGCCACTACTTACTACATCAACAAAACCTTAGGAACCCCTCAGACTTAGGTTTTGAGCTTGATAAACCTGAGCTAGCTTTGCATTATCCCCAGTTGCAGCAAAACCCTCACTACCCGCTCTTCCAATCCCAACAGCCTCTTCTTCAGGCACACAAACCCATGGCTTATGACTACTCATCATATGCATCAGGAAAAGGTATACCCTCAGAAGCACCTTTGATGGTGAAGCAACTGATGACAAACCCTAGAGACTGTGAAAGCGACAACGAGGGACTGAGGTATCAAGTTTCGGAGGGTGGCATGGAAGTTGGGTCATGCGAGGCAGCGACAGGAGGTGAAGAAATGGGTGGAGGAAGATCAGGTGAAGGAATGAATGAATGGGGTGTGCTTGATAGGCTTGTGACCTCTCATCTTGGTGCTCCTGTTAATGAAGACTCAAGCAAAGGGGTGAGGTTTGAAGATGCACCAAATCCACACCACCACCACCTCTCATTGCGTGGAGAGATAATGGACTTTTGGGGCTATTCTAAACAATGA 1116 0.4391 MASSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCKIGSTPQNEWYFFSHKDKKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKSDWIMHEYRLEDSNDPQANNNEEGWVVCRVFKKKNLFKVGNEGGSTQQLNNNSSSDTNARSFMHRDNSHYLLHQQNLRNPSDLGFELDKPELALHYPQLQQNPHYPLFQSQQPLLQAHKPMAYDYSSYASGKGIPSEAPLMVKQLMTNPRDCESDNEGLRYQVSEGGMEVGSCEAATGGEEMGGGRSGEGMNEWGVLDRLVTSHLGAPVNEDSSKGVRFEDAPNPHHHHLSLRGEIMDFWGYSKQ* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0020 371 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Lan13g0020 371 PANTHER PROTEIN BEARSKIN2-LIKE 5 230 IPR033519 -
Lan13g0020 371 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Lan13g0020 371 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
Lan13g0020 371 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Lan13g0020 371 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0020 Lan-Chr13 107047 109410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0020 1 361 NAC Transcription Factor Family AT1G33280 54.447 1.81e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan13g0020 NAM 1.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0020 - - gmx:100804181 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1946 8 25432042 25434063 Lan13g0020 13 107047 109410 LSH