Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0010 ATGGCTTCCGCAGTTACTCCCAAGATTCTATTATACAATCCTATCTTACGAAATGGGTCACCAAGGTTAAAGTTGTTGTTACTGAGACCAAGAAACTTAACCACTAGTTGTATAAATCTCAAGGTATATGCCTCCCAGTCACAGGACCCTCCTAGTCCTAGCAGTGGCAGAGCACCCCCTGTACCTGGAGTGGACACAAGAATCCATTGGGACAATGAAGATGAAGGTTGGATTGGAGGAGCTACCAAACAGCCAAAGGAGAAGAAGAACCCCAACAACCTGTTGGGTCATAACTTTACTGATTTGCTCTCCACTTCTTCTGATTCTCATTATCAGTTCTTAGGAATATCAGCAGATGCAGATTTGGAAGAAATAAAAGGTGCTTACAGAAGATTATCAAAGGAGTACCATCCAGACACAACATCCCTCCCTCTTAAAACTGCCTCTGAGAAATTCATGAAATTAAGAGAGGCTTACAATGTTCTTAGCAATGAAGAAAGTAGAAGGTTTTATGATTGGACCCTTGGTCAAGAAGCTGCAAGCCATGAAGCAGAGAAGATGAAGATGAGATTAGAGGATCCTTATCAGCAGGATGTTGAGAATTGGGAATCAGTCCCAGATATGGTTGATCGCCTTGGTGGAAAGAATTTGAAGCTTAGTGATCAAGCTGTTTCTGCCCTCACCATTGATATTTTTATCATTATTTTTTCCATATGTTGCATCATTTACGTAATCTTCTTTAAAGAACCATATTACTAG 759 0.4058 MASAVTPKILLYNPILRNGSPRLKLLLLRPRNLTTSCINLKVYASQSQDPPSPSSGRAPPVPGVDTRIHWDNEDEGWIGGATKQPKEKKNPNNLLGHNFTDLLSTSSDSHYQFLGISADADLEEIKGAYRRLSKEYHPDTTSLPLKTASEKFMKLREAYNVLSNEESRRFYDWTLGQEAASHEAEKMKMRLEDPYQQDVENWESVPDMVDRLGGKNLKLSDQAVSALTIDIFIIIFSICCIIYVIFFKEPYY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0010 252 MobiDBLite consensus disorder prediction 44 65 - -
Lan13g0010 252 SUPERFAMILY Chaperone J-domain 57 171 IPR036869 -
Lan13g0010 252 ProSitePatterns Nt-dnaJ domain signature. 152 171 IPR018253 -
Lan13g0010 252 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 33 251 IPR044618 -
Lan13g0010 252 CDD DnaJ 110 164 IPR001623 -
Lan13g0010 252 Pfam DnaJ domain 110 172 IPR001623 -
Lan13g0010 252 ProSiteProfiles dnaJ domain profile. 109 175 IPR001623 -
Lan13g0010 252 SMART dnaj_3 108 167 IPR001623 -
Lan13g0010 252 PRINTS DnaJ domain signature 111 129 IPR001623 -
Lan13g0010 252 PRINTS DnaJ domain signature 129 144 IPR001623 -
Lan13g0010 252 PRINTS DnaJ domain signature 147 167 IPR001623 -
Lan13g0010 252 Coils Coil 145 165 - -
Lan13g0010 252 Gene3D DnaJ domain 98 196 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0010 Lan-Chr13 52070 53102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0010 110 177 C2H2 Transcription Factor Family AT1G74250 38.889 7.61e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0010 K23051 - tcc:18610266 304.679