Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0008 ATGGCTTTCTGGGGAGTGGAAGTGAAACCGGGAAAGCCTTTTACTCATAAATATGATAATCTGAAAGGTAGGCTTCATATCTCTATGGCCACTTTGGGTTTTGGTTCTTCTACTTCCAAAAGCATTCTCCAATGTAACATTGGTAACAGAAGCCCTATCTATCTTTGTTCTCTATATCCTGGTAACACTGAATCACTCCAATTGAATTTGGAATTGGAAGAAGAAGCTGATCAAGTTATCTTCTCTGTTATTGGTCCTCGTAGTATTCATATTTGTGGTTATTATCTCTCTTCATCATTTTCCAATCCCACCAATCACCATTCTGAAGAAGAATCATTTGGTGAAGACATTGCTAACACCGAGTCTGACAACTCTGCTGATGATGATGACTATGATGATAGTTTTATCGATGATCAAGATCACCCTCAGGTTTTCCCACCATCGCCCCTTTCCAGTCAAGAGGAAACTTCCATTGATAACAAACCAAAACGTAAGAAAACTGGCCTCAGAAGGCTAAGGAAGTACCAATCAGTAGAGTCGGATGATGACGATGATGATAATAATTGTTCTGAAGAAAAGAACACTCTGCACAATGATCAAACAAAGGAAATTATTGATGATGAAGATTCCCTGCCAATTTCATCTCTGTATAAAAATAAAGCCTCTGAAAAGGTATTGCATCAGGAAATGGATGATGACAGAGCAGCAGGTGATGCCACTCACAAGAGTGCTGAAGATGGTGCCACTAATATCATTGAAACCGCCGTGAAAACTGAAAATGTCATTCAACATAGTCAGACACATAGCAGGGAAGTGGAAGTATTAGATCCTTGCACTGTTCTCGATGTTGGAAGTATTAAAAAGGAAAAAAAGAAGAAGAAGAAGGGAAAGACAAAAGAAACCAAGAATTCTTGTAATGGCCATTTTATCCAACCAGATAATGATGTGCAAGAAGAGCCAAAAATGGACAAGATGACCCATGACCTTCTGGCAGGAAAAGAACAATATCAGGAGCATGCTGATAACAAGGAAACTGAAACTTTCGATAAAATGGTAGCTTCCTCTGAGGTTATACATGGACAAGGTGAGAAGCCAAAAAGAAAAAGGAAAGAACGGTCAAAGGAAGAGGGAATAGCTCCCATTGTTAGTGGTGCTGATCATAGCAATATTGTTAATGATGCATCACCTCCAGCTGAAACGCCTGAAAAGAGGAAAAAGAGGAAAAAGAAAGAGCATGTAAAAGAAGACTCACACCTTGAAGGTGATAATGCACACCATGAAGATATTATGAACAAGCACAAATCCCGCAGAGATGCAGCAGAATTTGATAATGTGATTCATAAATTTCCTGAAGGAAAAGGGCAACATCAGAAAGTAACAAATGAAAATGTTGTGGACATCGGTGCTCATGACCTTCCTGATGGAAATCAATCTGAGGATAGAAAAGTTAAGAAAAAGAAGAAAAAGAGTAAAAGTCGGGGGGACGAGGAAGATGCAAAATCTTTTGAACAAAGTAGTGACGTGGTGAAGGAGGATGGAAACAAGAGGGCTGATGCAAAGCCTTCCAATGTTAAAACATTGTCAAGTGGAGTAGTTATTGAAGAGCTAGAAATGGGGATAAAAGATGGCAAAATTGCGGAATCAGGAAAAAGGATTAGCGTCCATTACACTGGGATGTTGAAGGAAAATGGAGTAGTGTTTGAGTCAAATGCTGGGCAGGCTCCTCTTAAATTTCGTCTTGGTAAAGGAGAAGTTTGCGAGGGTTGGGATGTTGGGCTTGAAGGCATGCGAGTTGGAGAAAAAAGGAGACTTGTAATCCCACCATCAATGATGTCTAAGAGTGAAGGACAGAGTGCAACAATACCATCAAATTCATGGCTGGTTTATGAGTTGGAATTGGTTAAAGTTCATTGA 1914 0.3966 MAFWGVEVKPGKPFTHKYDNLKGRLHISMATLGFGSSTSKSILQCNIGNRSPIYLCSLYPGNTESLQLNLELEEEADQVIFSVIGPRSIHICGYYLSSSFSNPTNHHSEEESFGEDIANTESDNSADDDDYDDSFIDDQDHPQVFPPSPLSSQEETSIDNKPKRKKTGLRRLRKYQSVESDDDDDDNNCSEEKNTLHNDQTKEIIDDEDSLPISSLYKNKASEKVLHQEMDDDRAAGDATHKSAEDGATNIIETAVKTENVIQHSQTHSREVEVLDPCTVLDVGSIKKEKKKKKKGKTKETKNSCNGHFIQPDNDVQEEPKMDKMTHDLLAGKEQYQEHADNKETETFDKMVASSEVIHGQGEKPKRKRKERSKEEGIAPIVSGADHSNIVNDASPPAETPEKRKKRKKKEHVKEDSHLEGDNAHHEDIMNKHKSRRDAAEFDNVIHKFPEGKGQHQKVTNENVVDIGAHDLPDGNQSEDRKVKKKKKKSKSRGDEEDAKSFEQSSDVVKEDGNKRADAKPSNVKTLSSGVVIEELEMGIKDGKIAESGKRISVHYTGMLKENGVVFESNAGQAPLKFRLGKGEVCEGWDVGLEGMRVGEKRRLVIPPSMMSKSEGQSATIPSNSWLVYELELVKVH* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0008 637 MobiDBLite consensus disorder prediction 314 350 - -
Lan13g0008 637 MobiDBLite consensus disorder prediction 103 207 - -
Lan13g0008 637 Gene3D - 476 637 IPR046357 GO:0003755
Lan13g0008 637 MobiDBLite consensus disorder prediction 360 377 - -
Lan13g0008 637 SUPERFAMILY FKBP-like 507 636 - -
Lan13g0008 637 MobiDBLite consensus disorder prediction 115 136 - -
Lan13g0008 637 MobiDBLite consensus disorder prediction 490 519 - -
Lan13g0008 637 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 254 - -
Lan13g0008 637 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 386 637 - -
Lan13g0008 637 MobiDBLite consensus disorder prediction 287 522 - -
Lan13g0008 637 Gene3D Nucleoplasmin core domain 1 100 - -
Lan13g0008 637 Pfam Nucleoplasmin-like domain 3 96 IPR041232 -
Lan13g0008 637 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 549 637 IPR001179 GO:0003755
Lan13g0008 637 PANTHER PEPTIDYLPROLYL ISOMERASE 386 637 - -
Lan13g0008 637 PANTHER PEPTIDYLPROLYL ISOMERASE 1 254 - -
Lan13g0008 637 MobiDBLite consensus disorder prediction 413 455 - -
Lan13g0008 637 MobiDBLite consensus disorder prediction 190 207 - -
Lan13g0008 637 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 544 634 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0008 Lan-Chr13 41788 46275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0008 547 635 Calmodulin-binding Proteins AT3G25230 41.111 1.01e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0008 K14826 - gmx:100798135 588.186