Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1355 ATGTCAGAAATGATGATGAGGGTATCTGATCCAAGCAAGCTGCACTTGAAGAAAGAGCTTACTCAAATTCGAAAAGCAGCTCGCGTGTTGAGAGATCCTGGCACTACTTCTTCATTCAAGAAATCACCCCTTACTTCTTCAAGATCTGTGCCGCTTCCATCTTCTTCTGCATGCCACAAGAACATTACAAGTTCTCTACTTGATTCTCATTTCGCTCTAAAACAGAAAGACAAAGACAAGAATGTGTTTTTGTACAATTGGAAAAACACTGAGCAAGTAGAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGATGGATCTTTGTCACTTTTGGGAAGTATGGAAGATCGTTTCAGTGATGCTACGAATGGTTGTGACTCAAAGAGTGACACCTACTTAGGCATCTTCAGATCTGTAGATGCAGCAGCAGCAGTATCTGCCATTAAGAAAAAAGAGAGTAAGAAACCCTATTCTCCACATTTGGATTTTTTAAACAAATATCAACAACATTCACAACACAATAATCTCAATCTAGGTGGTAATATTAGTACAAAGTCCAAGGCATTGCTTTTTACTAGGGATGACTCTGATAATGATACTGAAGAAGATTACTCTAATAATTCTGAGCATGTTAGACGAGTTTTTGGGGCTTCTCCTTTCCTTCTCAAACTCAAACGTAACAATTTGTTGAGAAGAAGCACCAAAGAGGACTCTTCTTATTCTTATAGCACTCCTGCACTATCAACCAGTTCCTATAATAGGTGCCCTCACCGTTATCCTAGCACTGTTGGATCCTGGGATGCCACCACAACTTCAATCAATGACAGAGATGATGCCAATGATGATCATTTGGCTTTGCCTGGTCGCCAAGGATGTGGAATTCCTTGCTATTGGTCTAAGAGGACTCTGAAACATCAAGGTGCTTGTAGAAGTTCTTACTCTCCTTCACTTTCGGATAGTTTAAGGAAAAAAGGAAGAAGCATACTATGTGGGAGTCAAAATATTTATCCAAGACACCGCAGATCCCCTTCAGCCTCTCACAAGCGCAAAATTTCTTTGAGGAGTGCTCAAGGTGTTATTCCATTGCTCTCTGACAGTGGTGATGTTAGAGGAGGTTCATCCATAGGAACTGGCCGTAGTGATGATGAACTTTCCACAAACTTTGGGGAGCTTGATCTTGAGGGCTTGAGCCGATTGGATGGGAGAAGGTGGTCATCCAGTTGTAGAAGTCAAGAGGGACTGGAGATTGTAGCTCTTAATGGAGCAGGGGAAGACGAAGGCACGCCTGAAAATAGTTGGAGTTTCAGTAAGAAATATAAGCCTGTGTTGTTTTGTGAAGTGATTGGGCAGAATATTGTGGTTCAGTCACTTATCAATGCTGTTTCGAGGGGGCGAATTGCTCCCATTTACCTTTTCCAAGGTCCGCGTGGGACTGGTAAAACATCAATTGCCAGGATATTTGCTGCTGCCTTGAATTGTGTGGCTCTTGATGAGAGTAAGCCTTGTGGCTACTGCCGGGAATGTGCTGATTTCATTTCTGGCAAGAGTAATGATTTACTTGAAGTTGATGGAACCGATAAGAAAGGAATTGATAGAGCTAGATATCTTTTGACAAGATTGCCAATTGGGTCATCATCAGCCTCCTCACGATATACAGTTTTTGTCATTGATGAGTGTCAATTGTTACCCTCCAAGACATGGCTGAGATTTCTCAAGTTTCTCGAAGAACCACCTCAGCGGGTTGTGATCATATTTATAACGTCTGATCTTGACAATGTGCCACGAACAATACAATCTAGATGTCAGAAGTATCTTTTTAACAAAATTAAGGATGTGGATATTGTTGCTAGGTTAAGGAAGATATCTGCTCAAGAGAACCTCAACATTGAAACAGATGCATTGGACCTCATTGCTATGAACGCAGATGGTTCACTTCGAGATGCAGAAACAATGTTAGAACAGCTTAGCTTGCTGGGAAAAGGAATTACTACTTCTCTTGTCAATGAACTTGTGGGAGTTGTTTCAGATGAGAAATTATTGGAACTTTTAGAGTTAGCTATGTCATCAGACACTGCAGAGACAGTGAAAAGAGCCAGGGAATTGATGGACTCTGGAATTGATCCAGTGGCTTTAATGTCTCAACTAGCTGGCCTCATTATGGACATCATTGCTGGATCATATACTGTTATTGATGCCAAACATGATGATTCATTCTTTGGTGGACGCAGTTTGAATGAATCAGAGTTGGAGAGATTAAAACATGCTTTGAAGCTTCTCTCAGAGGCTGAGAAACAGTTAAGAACTTCCAATGAACGCTCAACATGGTTTACTGCAACTCTGTTGCAGCTTGGTTCTATGCCCTCTCCAGATCTTACTCAGCCAGGCAGCAGCAGGCAGCAGAGCTGCAAGACAACAACTGAAGATAATCCATCTAGTGCTTCAAGAGATGTTACTGCTTGTGAGCATAAGTCAGACCTTCAATATATGCCTCGAAACTTAACATTCCCTGAATCCCAGCACATATTAGTTAATGGCAATTCCAGCCATCACAAGGATGTATCCTCAAAGAACGATGGTTTTAGGTTGAAATCAAAACCGTTGAATAACCCGGTCATAGATGATGGCTCCACAATTGTCTCATCTGATGATCTTATGGTTGGCAATATGATGCTTAGATGCATTAATTTGGAGAAGTTATATGATATCTGGGAGCGATGTATTGAGGGATGCCACTCTAAGACATTGAGACAGCTGCTACACGATCATGGAAAGCTTGTGTCCATATGTGAAGTTGAAGGTTTTTTGGTGGCATATGTTGCATTTGGCGATGGACATATTAAGCGTAGGGCTAAGAGGTTTTTGAGAAGTATTACAAACTCCATGGAAATGGTTCTTAGACACAATGTGGAGGTCAGAATGATCCATTTGCCAGATGGTGAAGGTGAAAATCTAGTTAATCTATCTAGTCTAAAGCAGGCAGAGTCCACAGTAGCAAACGAGAAGGACCAAAGAGGTCATATGAATGGAACAGAGTCTTGTTCTAGTTTCCCTCCTTTACTGGATGGAAACCTTCAATGTGCTTCCGATTCATCAGATATTCTGGCTGAAGGAAATGGTTTGAGGGAGAAGCGACGGGATAATCCAATGCAGAGAATTGAGTCTATCATCCGTGAGCAGAGGCTGGAGACTGCATGGTTACAGGCTGTTGAAAAAGGTTCCCCTGGATCGCTGAGTCGTTTGAGACTTGAGAAGAATCAAGTCCTGCCACAGGATGGTATATTTTGTGTAGACCCAAAGGAGTCCAGTGTGCATAAAACAAGATCTTCCTCTCAGCATTGGGAAGATGAGCTGAATAATGAACTCAAAATTTTGAGTGTTAAAAATGGAAAGGTCCTACAGAAGGATCAGATCGGTAGAAGGGCAGATCAGTACCCCATGTCTCCAAGTTTATTGCATGACAGCAGTTTAGCAATAAGTTCTGGCAAAGGCAATGTAGGATATGAATCGAGCCCTGGACCAGGTGGTTGTGGATTTTTATGTTGGAATAATTCCAAGCCTAGAAGGGTTGTGAAGGTAACAGGTGGTACCCCAGTTGGAGTTGGAGGAGGTAAAGAGGGGCGTTTTACATTGTTTGGTGAGTGTTGTAAGCCAAAGAAAAAGGACTTGAGAAGATAA 3675 0.4177 MSEMMMRVSDPSKLHLKKELTQIRKAARVLRDPGTTSSFKKSPLTSSRSVPLPSSSACHKNITSSLLDSHFALKQKDKDKNVFLYNWKNTEQVEEEEEEEDEDEDGSLSLLGSMEDRFSDATNGCDSKSDTYLGIFRSVDAAAAVSAIKKKESKKPYSPHLDFLNKYQQHSQHNNLNLGGNISTKSKALLFTRDDSDNDTEEDYSNNSEHVRRVFGASPFLLKLKRNNLLRRSTKEDSSYSYSTPALSTSSYNRCPHRYPSTVGSWDATTTSINDRDDANDDHLALPGRQGCGIPCYWSKRTLKHQGACRSSYSPSLSDSLRKKGRSILCGSQNIYPRHRRSPSASHKRKISLRSAQGVIPLLSDSGDVRGGSSIGTGRSDDELSTNFGELDLEGLSRLDGRRWSSSCRSQEGLEIVALNGAGEDEGTPENSWSFSKKYKPVLFCEVIGQNIVVQSLINAVSRGRIAPIYLFQGPRGTGKTSIARIFAAALNCVALDESKPCGYCRECADFISGKSNDLLEVDGTDKKGIDRARYLLTRLPIGSSSASSRYTVFVIDECQLLPSKTWLRFLKFLEEPPQRVVIIFITSDLDNVPRTIQSRCQKYLFNKIKDVDIVARLRKISAQENLNIETDALDLIAMNADGSLRDAETMLEQLSLLGKGITTSLVNELVGVVSDEKLLELLELAMSSDTAETVKRARELMDSGIDPVALMSQLAGLIMDIIAGSYTVIDAKHDDSFFGGRSLNESELERLKHALKLLSEAEKQLRTSNERSTWFTATLLQLGSMPSPDLTQPGSSRQQSCKTTTEDNPSSASRDVTACEHKSDLQYMPRNLTFPESQHILVNGNSSHHKDVSSKNDGFRLKSKPLNNPVIDDGSTIVSSDDLMVGNMMLRCINLEKLYDIWERCIEGCHSKTLRQLLHDHGKLVSICEVEGFLVAYVAFGDGHIKRRAKRFLRSITNSMEMVLRHNVEVRMIHLPDGEGENLVNLSSLKQAESTVANEKDQRGHMNGTESCSSFPPLLDGNLQCASDSSDILAEGNGLREKRRDNPMQRIESIIREQRLETAWLQAVEKGSPGSLSRLRLEKNQVLPQDGIFCVDPKESSVHKTRSSSQHWEDELNNELKILSVKNGKVLQKDQIGRRADQYPMSPSLLHDSSLAISSGKGNVGYESSPGPGGCGFLCWNNSKPRRVVKVTGGTPVGVGGGKEGRFTLFGECCKPKKKDLRR* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1355 1224 MobiDBLite consensus disorder prediction 35 55 - -
Lan12g1355 1224 PANTHER PROTEIN STICHEL-LIKE 1 166 1161 - -
Lan12g1355 1224 CDD HLD_clamp_pol_III_gamma_tau 609 672 IPR045085 -
Lan12g1355 1224 MobiDBLite consensus disorder prediction 786 817 - -
Lan12g1355 1224 Gene3D - 673 787 - -
Lan12g1355 1224 SMART AAA_5 466 616 IPR003593 -
Lan12g1355 1224 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 434 783 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lan12g1355 1224 Gene3D - 427 607 IPR027417 -
Lan12g1355 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 659 IPR027417 -
Lan12g1355 1224 CDD AAA 448 606 - -
Lan12g1355 1224 SUPERFAMILY post-AAA+ oligomerization domain-like 680 781 IPR008921 GO:0003677|GO:0006260
Lan12g1355 1224 Pfam DNA polymerase III subunits gamma and tau domain III 663 782 IPR022754 GO:0003887
Lan12g1355 1224 Gene3D - 611 672 - -
Lan12g1355 1224 MobiDBLite consensus disorder prediction 26 55 - -
Lan12g1355 1224 Pfam DNA polymerase III, delta subunit 449 609 - -
Lan12g1355 1224 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 166 1161 - -
Lan12g1355 1224 Coils Coil 745 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1355 Lan-Chr12 19019777 19026085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1355 430 724 Core DNA Replication Machinery Family AT1G21690 24.342 1.64e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1355 - - gmx:100814391 1668.29