Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1349 ATGGAAACGGAGCAGTGGTTACACTACTACTATTCTGATTGTGATGATGAAGAAACCTTCAGCTTTAATGGGTTGAAGATGAATGATTCAGATGAGTTGTTTGAGATCAATATTATGAAGGAGGAGAAGATGAGTTTGGATACAATAATAGAAGAGTACGAGAACGAGAGCAGTACTGTGTTCTCTCTTGATATTCATAACTGGATAGATGCTATTTACGTGGCTGTTGATGATCATGGAGATTCAAGCTTGCATGCGCTTTCATGGGCATTGAAGCATGTTGTCACACCTTCTACCACTCTCTTTCTCATACACGTCTTCCCTCAAATCAAATTCATTCCAACTCCATTGGGAAAAATTCCTAGGAGTCATGTACATCCAGATTATGTTAACATGTACTTGACCCAAGAGAGAGGCAAGAGAAAATTTGTTGTTCAAAACTTCATCCACCATCTATGCCTTGATTCAAAGGTTAAGGTGGAGATAATGCTTATTGAGGGTGACAACGTTGCCAAAGCCATTGTAGACATTGTTGGGACTCTTAATATAAGGAAATTGGTGATTGGAACTACCAAAGCTAACTTAAATAGAAATAAAAGTGAGAGTGGAAGAGGAAATGGCATAGGAGAGAAGGTAGTGAAGAATGCCCAAGAAAGCTGTGATGTTAAAATCATATGTGAAGGAAGGGAAGTGAGTGAGAACTACATAATCAGGTGCAATTCATCAAGCTTCGCAGACCAACTTGATCACTCCAGTGCTTTTCACCCTCTTTTGCGTTTTCTGTCCAATCTTATGTCGTTATTTAGGTCCAGACATTTATCACCAACATGA 831 0.3911 METEQWLHYYYSDCDDEETFSFNGLKMNDSDELFEINIMKEEKMSLDTIIEEYENESSTVFSLDIHNWIDAIYVAVDDHGDSSLHALSWALKHVVTPSTTLFLIHVFPQIKFIPTPLGKIPRSHVHPDYVNMYLTQERGKRKFVVQNFIHHLCLDSKVKVEIMLIEGDNVAKAIVDIVGTLNIRKLVIGTTKANLNRNKSESGRGNGIGEKVVKNAQESCDVKIICEGREVSENYIIRCNSSSFADQLDHSSAFHPLLRFLSNLMSLFRSRHLSPT* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1349 276 Coils Coil 36 56 - -
Lan12g1349 276 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 73 195 - -
Lan12g1349 276 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 27 264 - -
Lan12g1349 276 Pfam Universal stress protein family 71 216 IPR006016 -
Lan12g1349 276 Gene3D HUPs 68 225 IPR014729 -
Lan12g1349 276 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 27 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1349 Lan-Chr12 18994506 18995674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1349 80 244 Plant U-box Gene Family AT5G57035 31.953 3.72e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1349 - - gmx:100799795 261.536