Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1343 ATGCAGATGGCTCAAAAGCACTCACCTTCAGGTGCGATCCATTTGTACCAGCAGCCTGTGCAAAGTGTGTACCAAATATTACAAAGCAATAATCCATGGCATGATAGCAACAGCCAGGGAGCCACCATTTGTTTTGAAACCATTAAAGACCAATATTTTACCCTTGAATCATCATCCCCAGCAACCAATGCTCTTATAGGTTGTGATTCCCCTTCCTATGCAAGCATATCATCTAATAATAGGATTCCATTGTCTCCACAACAAGGTTCTCAATCATGCCATTCAGATCACCACCATTCATCTGACATCACATATGGTTCACCAATAAGTGGGTACTCTTCTAGTAGTGCTGATGATGATGCCACTGACCTGAAGCATAGACTTAGAGAACTAGAGATACAATTGTTGGGGCCTGATCAATCAGATATTGTTTACAGTTATGGCTGCTGCTTCGTCAACAATGGCCTCCATGGAGCATCTCCTCCAATATCTAAATATGATTGGGATCAAATTGCAGTAATGATTCCAAAGTTAAACCTAAGAGATGTCCTCATGCTTTGTGCACAGGCTGTATCTGATGATGATATTCCAAGAGCAGTTGGGTGGATGGATAATGTGTTGGGGAAGATGGTATCAGTTTCTGGGGATCCAATCCAAAGATTGGGTGCTTATTTGTTGGAAGGGCTTAGAGCTAGGTTGGAATCATCAGGAAGTGTTATCTACAAATCATTGAAGTGTGAACAACCATCAGGCAATGAATTAATGACTTACATGCACATCCTCTATAAGATATGCCCATATTGGAAGTTTGCATACATATCTTCAAACGCTGTGATTGCAGAAGCAATGGCAAATGAATCCATCATTCACATAATTGATTTCCAAATTGCACAAGGCACACAGTGGCAACTACTAATGGAGGATCTTGCTCGTAGGCCTGGTGGACCCCCTTCCATTCGTATAACTGGTATTGACGATTCCGAATCATTTTATGCTCGTGGTGGAGGACTTGAGATTGTAGGAAAACGGCTCTCAAATATTTCCAGGTCCTATGGAGTTCCATTTGAGTTCCATAGTGTAGCAATGTCTGCATGTGTGGTTGAAAAAGAAGATCTTGGGGTTCGACCCGGTGAAGCTGTGGCAGTAATTTTTCCATATGTTTTGCACCACATGCCAGATGAGGGTGTGAGCATGGAGAATCATAGAGACAGAGTGTTGAGATTGGTAAAGAGCTTGTCTCCAAAGGTTGTGAGCCTTGTTGAGCAAGAATCCAACACCAACACTTGTCCATTCTTTCATAGGTTTGTGGAGACAGTGGATTATTATAGTGCTATGTTTGAATCAATAGATGTGGCTTGCCCAAGAGAGGATAAGAAGCGGATTAGCACAGAGCAGAACTGTGTGGCTAGGGACATAGTGAGCATGATAGGTTGTGAGGGGATAGAGAGGGTGGAAAGGCATGAAGTTTTTGGAAAGTGGAAGTCAAGATTTAACATGGCAGGATTTAAGCAGTGTCCATTGAGTTCTTCAGTGATGGGTGCTGTGAGAGATATGTTGAAAGAGTTCAGTGCAAATTATAGGCTTCAAAATAGAGATGGCACTCTATATCTTGGGTGGATCAACAGAGCAATGACCACCTCTTCTGCTTGGAGATGA 1656 0.4239 MQMAQKHSPSGAIHLYQQPVQSVYQILQSNNPWHDSNSQGATICFETIKDQYFTLESSSPATNALIGCDSPSYASISSNNRIPLSPQQGSQSCHSDHHHSSDITYGSPISGYSSSSADDDATDLKHRLRELEIQLLGPDQSDIVYSYGCCFVNNGLHGASPPISKYDWDQIAVMIPKLNLRDVLMLCAQAVSDDDIPRAVGWMDNVLGKMVSVSGDPIQRLGAYLLEGLRARLESSGSVIYKSLKCEQPSGNELMTYMHILYKICPYWKFAYISSNAVIAEAMANESIIHIIDFQIAQGTQWQLLMEDLARRPGGPPSIRITGIDDSESFYARGGGLEIVGKRLSNISRSYGVPFEFHSVAMSACVVEKEDLGVRPGEAVAVIFPYVLHHMPDEGVSMENHRDRVLRLVKSLSPKVVSLVEQESNTNTCPFFHRFVETVDYYSAMFESIDVACPREDKKRISTEQNCVARDIVSMIGCEGIERVERHEVFGKWKSRFNMAGFKQCPLSSSVMGAVRDMLKEFSANYRLQNRDGTLYLGWINRAMTTSSAWR* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1343 551 ProSiteProfiles GRAS family profile. 171 551 IPR005202 -
Lan12g1343 551 MobiDBLite consensus disorder prediction 79 94 - -
Lan12g1343 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 550 IPR005202 -
Lan12g1343 551 Pfam GRAS domain family 180 551 IPR005202 -
Lan12g1343 551 MobiDBLite consensus disorder prediction 79 101 - -
Lan12g1343 551 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1343 Lan-Chr12 18962233 18963989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1343 1 551 GRAS Transcription Factor Family AT4G17230 55.696 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan12g1343 GRAS 4.9e-117 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1343 - - gmx:100792931 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1343 12 18962233 18963989 Lan4g0528 4 7831094 7834808 PCT
Lan12g1343 12 18962233 18963989 Lan19g0722 19 13549046 13552310 PCT