Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1329 ATGATCAGAATGGAGGTTGCAGTTCCAAATCCAGGAAAGTCAAATCGAAATGTCAATGATAAACTGGAGTTTTCAAGATGCTCAAAACCTTCTGGAACTTCCAAGAGAAAGGCTGAAAACGTTCAGACATATGGTAACAAGAAACTCTCTGCCTCAAACATGAAAAGGAAATTTGAAGATGATGATTACTTGATTGACAATTCAGAAGAAGATGAAGAAATGCACTTTCTTTTGAAGACAAAATCCAGGAGCAGAGCTAGAACAACGGATAACATAATGGGTGTTGGGAAAAATCCTCGGTTATGCCACCAGTGCAAAAAGGAGAGAACAGCTTTTGTGCCCTGTACTAAATGTCCGAAAATGTACTGTATGCGATGCATCAACCAGTGGTATCCTGACATGACAATAGAAGACATTGCGGAGAGTTGCCCATTTTGTTGTAAAATTTGCAATTGTAATGGTTGCTTGCATTTAAGAGGGCTGATTAAGACATCTAACGGGGACATCACTGATTATGAAAAAATTCAACATCTGAAATATATGGTTAAGTTACTACTTCCATTTGTGAAACAAATTTGTCATGAGCAGAGTCAAGAGGAAGAGATTGAAGCTAAAATACAAGGAAAATTATGTTGTGAGGTTGAGATACGACAAAGCCTTTGCGGTGACAATGAACGTGTCTACTGTGATCATTGTGCTACTTCAATCATTGACCTTCATCGGAGCTGCCCCAAGTGTTCATATGAACTCTGCCTAAGTTGTTGCCAAGAAATACGTAATGGAATTATTGCACCCCGAACTGAGATGAAGTTCCAATATGTGAACAGGGGCTATGATTATATGCATGGTGGTGACCCTCTACCAGTATCTTGTGATCTAGGGACTTCAGAGGGTCCTATTGAGTTATCAACTAAGTGGACTGCCAAGCGGAATGGAAGTGTTAGTTGTCCACCAGAGGAAGAGGGGGGCTGTGGTAGTTCTTTATTGGAGCTGAAACGTATCCTTCCACATGGGTGGATATCTAACTTAGAAGCCAAAGCTCATAGTATGCTAAAAAGTTGGGAAACGGAACATACAACTCTCTGGCAGAAAGAAGCAGCATTAGGCTACAACTCTATGAGATGTGCAGCTTCTAGAGAAGGCACTAATGACAATAACATATACTGTCCAGAGTCAAAAGACATTTTGAAAGATGGGCTGTTGCTTTTCCAAAAGCATTGGACAAATGGCAAGCCTGTTATAGTTCGTGACGCTCTTAATCAGGGGACAGGTCTGAGCTGGGAGCCAATGGTCATGTGGAGAGTGTTATGTGAAAACGCGGTTTCAGAAATCAGCTCAAAAATGTCAGAAGTGAAGGCCATTGATTGCCTAGCTGGTTGTGAGGTAGAAATTAATACTCACAAGTTCTTTAAAGGTTATACAGAGGGAAGAACATATAGAAATTTATGGCCAGAGATGCTCAAGCTGAAAGACTGGCCCCCTTCTGACAAATTTGAAGATCTTTTGCCCCGCCATTGTGATGAGTTTATTCGCTTCTTGCCATTTCAAGAGTATACTGATCCTCGGGCTGGAATTTTCAATCTTGCAGTAAAGTTGCCAGCGCATGTCCTAAAACCTGACATGGGTCCAAAAACGTATATTGCATATGGGATTAAAGAAGAACTTGGTAGAGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTGAATATTTTGACTCATACAGCTGAGGTGATATTTAGTGATGAACGGCAAGCTGTTATTTCAACCTTGAAAGAAGCACACAAGGCACAAGATGAAAAAGAATGCCTTTCTCAAGAAAGGGTTGCTGAATGCCTGAATGGTCTACCTTTCAAAGATAAGGTTATTGATAACAATGGAAAGATGTTTCCAAATGATGTGTCTGAGGTGGCCACTTTTCCTGCTGCTATCTCTACCAAAAATGAAACAAATGAAACTGGTGGTGCACTATGGGATATCTTTCGGAGAGAGGATGTTGGAAAGTTAGAGACATATCTAAGAAAGCACACAAAAGAATTTAGGCATACTTATTGTTCTCCGGTTCAACAGGTTTTCCATCCAATTCATGATCAATGTTTTTATTTGACTATGGAGCACAAGAAGAAGCTGAAGGAGGAGTTTGGTGTAGAACCTTGGACTTTTGAGCAGAAACTTGGGGAGGCCGTATTTATTCCTGCTGGATGCCCACACCAAGTTAGGAATCTCAAGTCATGCACAAAAGTTGCTGTAGACTTCGTGTCCCCAGAAAATGTCCACGAGTGTCTGCGTTTAACTAATGAGTTCCGTCAGCTTCCCAAGAATCACAAGGCTAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTATATGCCGTTGATCAAGCTCTCAAAGACTTAGAAGCTTTAGCTAAGTGTTCCTGA 2430 0.4082 MIRMEVAVPNPGKSNRNVNDKLEFSRCSKPSGTSKRKAENVQTYGNKKLSASNMKRKFEDDDYLIDNSEEDEEMHFLLKTKSRSRARTTDNIMGVGKNPRLCHQCKKERTAFVPCTKCPKMYCMRCINQWYPDMTIEDIAESCPFCCKICNCNGCLHLRGLIKTSNGDITDYEKIQHLKYMVKLLLPFVKQICHEQSQEEEIEAKIQGKLCCEVEIRQSLCGDNERVYCDHCATSIIDLHRSCPKCSYELCLSCCQEIRNGIIAPRTEMKFQYVNRGYDYMHGGDPLPVSCDLGTSEGPIELSTKWTAKRNGSVSCPPEEEGGCGSSLLELKRILPHGWISNLEAKAHSMLKSWETEHTTLWQKEAALGYNSMRCAASREGTNDNNIYCPESKDILKDGLLLFQKHWTNGKPVIVRDALNQGTGLSWEPMVMWRVLCENAVSEISSKMSEVKAIDCLAGCEVEINTHKFFKGYTEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRFLPFQEYTDPRAGIFNLAVKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVIFSDERQAVISTLKEAHKAQDEKECLSQERVAECLNGLPFKDKVIDNNGKMFPNDVSEVATFPAAISTKNETNETGGALWDIFRREDVGKLETYLRKHTKEFRHTYCSPVQQVFHPIHDQCFYLTMEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLEALAKCS* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1329 809 ProSiteProfiles Zinc finger RING-type profile. 102 146 IPR001841 -
Lan12g1329 809 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 34 808 - -
Lan12g1329 809 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 34 808 IPR045109 GO:0032454|GO:0033169
Lan12g1329 809 Pfam JmjC domain, hydroxylase 652 755 IPR003347 -
Lan12g1329 809 CDD cupin_RmlC-like 695 756 - -
Lan12g1329 809 ProSiteProfiles JmjC domain profile. 521 772 IPR003347 -
Lan12g1329 809 SUPERFAMILY Clavaminate synthase-like 402 805 - -
Lan12g1329 809 MobiDBLite consensus disorder prediction 1 44 - -
Lan12g1329 809 SMART cupin_9 502 772 IPR003347 -
Lan12g1329 809 MobiDBLite consensus disorder prediction 24 44 - -
Lan12g1329 809 Gene3D Cupin 385 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1329 Lan-Chr12 18904329 18909711 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lan12g1329 JmjC 2.1e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1329 K15601 K21989 gmx:100797860 1197.19