Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1304 ATGGCCTCTCCAGATCCACCCTCCGCTATCCCCCTCCAACAACCTCCCCCTTCCTCCTCCTCCCGCCGCCTTCCTCCTCCGTGCTGGTCCCCCGACGAGACCCTCGCCCTCATCCATTCCTACCGCCACCGGTGGCACTCCCTTGGCCGCGGCAACCTCAAGGCCAACCACTGGCAGGAGGTCGCCGACGCCATCTCCGCCCGATGCCCCTACGTCTCACCTCCCAAAACCCCCATCCAGTGCCGCCACAAGATGGAGAAGCTTCGGAAGCGTTACCGTACTGAGATCCAACGCGCTAACTCACTCCCTCTCTCTCCTTTCAACTCCTCTTGGCCTCACTTCAACCTCATGGATTCCATGGAGAAAGGACTCAAACAAGAGAACGATTCCGATCAAGAGATCAAAAACGGACACGGTTTACAAGGATCTAACGCTAGAAGCTTGAACAATTTGTATAGGAATGGATTTGGTGGTGGATTTAGAATTCGAATTCCAACTGGTTTCAACATACCTCAACCTCAACCTGTGAATCAGAGAGTGAACCCTAATTTGAATTACGGAACTAGGGTTACGGGGAAAAAGAGGGAGAGAGATCCAGTAGTATCTGCGATTAAGGTAATGGGTGATGGATTTGTGAAGATGGAAAAGATGAAGATGGAGATGGCGAAGGAAATTGAGATTATGAGAATGGAAATGGAAATGAAACGCACTGCGATGATTCTTGAATCTCAACACAGGATAGTGGAGGCTTTCGCTAAAGCGGTTTCGGAGAAGAATAAGGCTTAG 786 0.5089 MASPDPPSAIPLQQPPPSSSSRRLPPPCWSPDETLALIHSYRHRWHSLGRGNLKANHWQEVADAISARCPYVSPPKTPIQCRHKMEKLRKRYRTEIQRANSLPLSPFNSSWPHFNLMDSMEKGLKQENDSDQEIKNGHGLQGSNARSLNNLYRNGFGGGFRIRIPTGFNIPQPQPVNQRVNPNLNYGTRVTGKKRERDPVVSAIKVMGDGFVKMEKMKMEMAKEIEIMRMEMEMKRTAMILESQHRIVEAFAKAVSEKNKA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1304 261 MobiDBLite consensus disorder prediction 173 193 - -
Lan12g1304 261 MobiDBLite consensus disorder prediction 1 24 - -
Lan12g1304 261 Gene3D - 29 94 - -
Lan12g1304 261 PANTHER TRANSCRIPTION FACTOR 10 260 - -
Lan12g1304 261 SMART 118neu2 36 125 IPR006578 -
Lan12g1304 261 MobiDBLite consensus disorder prediction 1 26 - -
Lan12g1304 261 Coils Coil 82 102 - -
Lan12g1304 261 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 260 IPR044823 -
Lan12g1304 261 ProSiteProfiles Myb-like domain profile. 29 89 IPR001005 -
Lan12g1304 261 Pfam Myb/SANT-like DNA-binding domain 27 120 IPR044822 -
Lan12g1304 261 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1304 Lan-Chr12 18747758 18748734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1304 28 120 Trihelix Transcription Factor Family AT3G14180 37.634 1.42e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan12g1304 Myb_DNA-bind_4 4.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1304 - - lang:109361965 448.743