Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1240 ATGGCGCTTTTCAGAAGGTTCTTCTACCGGAAGCCCCCGGATCGGCTTCTTGAGATATCTGAGAGGGTTTATGTTTTTGATTGTTGCTACTCCATGGATGTCTTGGAAGAAGATGAGTACAGAGTTTATATGGGAGGAATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAACTTTAAAGAAGGGGACAGACGTAGCCAAATCTCAGATATATTTTCTCAGTATGACATGACAGTTATGGAATATCCTCGGCAATATGAGGGTTGTCCACTTTTGCCTTTGGAGATGGTACATCACTTTCTTCGATCAAGCGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTGATTTTGATGCATTGCGAAAGGGGAGGTTGGCCCGTGCTGGCGTTTATGCTAGCAGGTCTTCTGTTATACCAGAAACAGTACATTGGGGAGCAGAAGACTCTCGAAATGATCTACAAGCAAGCCCCCAAAGAACTTCTCCACCTTTTATCTCCCTTGAACCAGCAACCTTCTCAGTTCAGATATCTTCAGTATATTTCCAGGAGACATTTCGGTTCCGAGTGGCCTCCATCAGATACACCCTTGTATTTGGATTGTCTGATTCTTAGAGACCTTCCATTAGTTGATGAAGGAAAAGGTTTTAGGCCTGTTGTATGTGTTTATGGGCTAGACCCTTCAAAACCTGACAATAAAAGTTCAAAGCTTCTTTTCTCAACTTCAAAATCCAAGAAACATATTCGCCACTACTCACAGGCAGAGTGTATGCTCGTGAAAATTGATATCCATTGTCATGTTCAAGGGGATGTCGTTCTTGAGTGCATAAACTTAAATGAAGATTTTACTCGTGAGGAGACGATGTTTAGAGTCATGTTTCATACTGCATTTGTGAGGTCAAATATATTGATGCTGAGCTGTGATGACATTGATATTTTGTGGGATTCAAAGGATCAATTTCCCAAGGACTTCAAAGCAGAGGTGTTTTTTTTGGATGCTGATGCTGCTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGACTGAAAGCACTTTACCTGGGGAATTCTATGAAGTGGAAGGGATTTTCAGCAATGTAAGTGATGCACAGGAAGGAAAGGGGGAGTATGATTCTCTTGCTTTCCATGACAATGCAGTGGATGATGAAAATAATAAAGAGGTCTGGAAGGAGGAGGTGATTCCTTATGCTTTCCAGGATAGTCCACCAGATGAGGGGAATAACAAACAGGTTGAGAAAATTGACTCTGGTATTAATGAGGTGAAAGACATATCTGTTTATAATGTGAAGTACATGATCGTTGAGAGCGTCGGTCCAGTTAATGATGCAGTGAAAGACATTGCTGTGGATGAAGGAGAAAATAAGTCAACTTCTATTACATTGGCTTCTGATAAAATTCTCGAAACAGTGGATTTCACCTTGGATGTGCACGAGGAATTGACACTCGAGGAAAACAAGTATGACGAAGATGACCAAGCAACAGAAAAGGAATTTGATTCCGAGGCTGGGGAGCAGATGCCTGATCTTTCAAGACCTAAACCTGGTAAACAAATTCCATCTACTGCAAAGAAACAACTTCCATCTAACTCAAAGCCTTTTGGAGATACAATTTCAGCAAAACCAAAGATTAAACAAGAATCACAAGGTTTTCAGGTAAAACAAGCTAAGCCGAATGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTACACAAGTTCAATGCATGTCTATTATCCACCATCAAGGATTAATAGTGCACCAGCTGATCTGTCAAAATTTACTGTTTCAAAGGAGAAAATGGAAGATCCCAAAGCAAGGTCTTTATCTGCAGCCGTTGTTTCCATTGACATGACAAATGACCTGAAAAGTCGAAAGGTGATCACTTCAAAATCTTCAGGCCACATAGCACCCGAAGCAGATGCAAACTGCCCACCATCATCATTACTGACCGTTAAAGAGACATGTATTCAGTCAGCTACTCAAACACAAGCGGGCTCAGAGCTACGCCCTCCTCCTCCTCCTCCAACTCATGCCAGAAACTCTTCATTAGATGTTTTGGAACCCTTATCGTCACAGGATGCTGCGTCAACTCAAGCCCCTCCATCACCACCAGTGTCATCACCTTTCTCTTTAGGTGGAAAGGGATTTAGTGTACCACTGCCGCTACCAACTTTAACACCATTTGCTGGACAAAAAATAGGGGCAAATTTACAACCTGCAACTTCTCCTCCTCCTCCTCCCCCTCCCCCTCCACCTTCATTTTTTGGGCAAAATAATGGGAGCTTCCTACCTTCTCCATTTCCCTGGAAGTCTGACAATTCAATAATTGCCGTATGTGAAGAGACTTCTGGTTCTCTACCACTTCCCTCATCCTTCAGTGAAAAATCATCAAAAGTCTCTGAAGTGCTTACTGTAATAGCCCCTCCTCCTCCTCCACCGCCACCACCACCACCACCGCTGCCTCCTCCAAGGTTTGGAGTTTCATCCATTCCTCCTCCACCTCTTCCTGCATTTTCCACACATAGGATTTCACCCCCTCCTTCTCCACCACCCTCAACTGCATCACATGCAGCTCCATCAACACCCCCTCCACCGGCTCCCCCTCCCCTTCCGCTTCCTTTCAGCATTGCTCCAAAGCCTCCACCTCCTTATTGTAGTGCAGCTCCACCGCCACCACCACCTCCCCCTCCTTTAAGCAAAGCTCCCCCACCACCACCTCCACTTCCTTATAATAGTGCTCCGCCTCCACCTCCTCCGCCCTCTCCTGGTGGTCGAGGCCCACCTCCCCCACCACCTCCTAGTGCTCCAGGTGCTCCTCCTCCTCCTAGACCTCCTGGTGGTGCAGCTCCACCAGCTCCACCAAAAGGTGCAAATGCTGGAGCTGATCCAAGAGGGAAAGGGCGTAGTGGATATGCACGCCCAGCAGGACCTGGTGCAATGGCACCCAAGCGATCCTCCTTAAAGGCTCTACATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGCAGAATTACAAAGACACGGAGAACCTCAAATTGCATCAGAGTTTGATGTATCAGAGTTAGAGAAGCTTTTCTCTGCAAATGTTTCCAAAACTGCTGACTCTAAAACTGGCGGGCGGCGCAAATCTGTTGGATCTAAAACAGACATAGTCCACTTGATCGACCTGAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATTCCACTTCCTGATATGATGGCTGCAGTGCTGGCTATGAATGAGTCAGTATTAGATGTTGATCAGGTGGATAATCTCATTAAGTTTTGTCCTACAAAAGAGGAGATGGAACTTTTGAAGGGATACACAGGTGACAGGGCGAACTTGGGGAAGTGTGAACAGTATTTTTTGGAGATGATGAATGTGCCACGGGTGGAATCAAAATTAAGAATATTCTCTTTCAAGATTCAGTTTGGGTCTCAGGTTACAGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTTCGAAATTCTGTCAAACTGAAGTTGATCATGAAGAAAATTCTTCTTTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGGTCTGCAGTTGGATTCAAGTTGGATAGTCTCTTAAAGCTCACCGACACTCGTGCTACTAACAATAAGATGACACTAATGCATTATCTTTGCAAGGTCCTTGCTGAAAAGTCGCCTGCACTCCTTGATTTTCATCTAGACCTTGTTAGCCTGGAACCTTCCACCAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCAACAAGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTCTAAATGATGGACTTGTGTCTGACGTTTTCCCAAAGTCATTGAAAGGTTTCATAGATGTAGCCGAGTCCGAGGTGGTATCTCTAACGAATCTATACTCTGTGGTGGGTAGAAATGCAGATGAACTTGCACTGTACTTCGGTGAAGATCCTGCTCGTTGTCCATTTGAGCAAGTTACTGTAACCATCTTAAATTTTGTGAGGTTGTTTCGGAAAGCCCATGAAGAGAATTGCAAACGCAGAGTTAGAGAATAA 4146 0.4424 MALFRRFFYRKPPDRLLEISERVYVFDCCYSMDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFKEGDRRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMVHHFLRSSESWLSLEGQQNVILMHCERGGWPVLAFMLAGLLLYQKQYIGEQKTLEMIYKQAPKELLHLLSPLNQQPSQFRYLQYISRRHFGSEWPPSDTPLYLDCLILRDLPLVDEGKGFRPVVCVYGLDPSKPDNKSSKLLFSTSKSKKHIRHYSQAECMLVKIDIHCHVQGDVVLECINLNEDFTREETMFRVMFHTAFVRSNILMLSCDDIDILWDSKDQFPKDFKAEVFFLDADAAIPDLTTVTVSEDANETESTLPGEFYEVEGIFSNVSDAQEGKGEYDSLAFHDNAVDDENNKEVWKEEVIPYAFQDSPPDEGNNKQVEKIDSGINEVKDISVYNVKYMIVESVGPVNDAVKDIAVDEGENKSTSITLASDKILETVDFTLDVHEELTLEENKYDEDDQATEKEFDSEAGEQMPDLSRPKPGKQIPSTAKKQLPSNSKPFGDTISAKPKIKQESQGFQVKQAKPNAVTRWIPSNKGSYTSSMHVYYPPSRINSAPADLSKFTVSKEKMEDPKARSLSAAVVSIDMTNDLKSRKVITSKSSGHIAPEADANCPPSSLLTVKETCIQSATQTQAGSELRPPPPPPTHARNSSLDVLEPLSSQDAASTQAPPSPPVSSPFSLGGKGFSVPLPLPTLTPFAGQKIGANLQPATSPPPPPPPPPPSFFGQNNGSFLPSPFPWKSDNSIIAVCEETSGSLPLPSSFSEKSSKVSEVLTVIAPPPPPPPPPPPPLPPPRFGVSSIPPPPLPAFSTHRISPPPSPPPSTASHAAPSTPPPPAPPPLPLPFSIAPKPPPPYCSAAPPPPPPPPPLSKAPPPPPPLPYNSAPPPPPPPSPGGRGPPPPPPPSAPGAPPPPRPPGGAAPPAPPKGANAGADPRGKGRSGYARPAGPGAMAPKRSSLKALHWSKVTRALQGSLWAELQRHGEPQIASEFDVSELEKLFSANVSKTADSKTGGRRKSVGSKTDIVHLIDLRRANNTEIMLTKVKIPLPDMMAAVLAMNESVLDVDQVDNLIKFCPTKEEMELLKGYTGDRANLGKCEQYFLEMMNVPRVESKLRIFSFKIQFGSQVTEFKKSLNTVNSACEEVRNSVKLKLIMKKILLLGNTLNQGTARGSAVGFKLDSLLKLTDTRATNNKMTLMHYLCKVLAEKSPALLDFHLDLVSLEPSTKIQLKSLAEEMQAINKGLEKVKQELAASLNDGLVSDVFPKSLKGFIDVAESEVVSLTNLYSVVGRNADELALYFGEDPARCPFEQVTVTILNFVRLFRKAHEENCKRRVRE* 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1240 1381 MobiDBLite consensus disorder prediction 644 663 - -
Lan12g1240 1381 SMART PTEN_C2_2 198 338 IPR014020 -
Lan12g1240 1381 MobiDBLite consensus disorder prediction 756 772 - -
Lan12g1240 1381 Gene3D Protein tyrosine phosphatase superfamily 14 203 IPR029021 -
Lan12g1240 1381 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Lan12g1240 1381 Pfam Formin Homology 2 Domain 999 1367 IPR015425 -
Lan12g1240 1381 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Lan12g1240 1381 SMART it6_source 994 1381 IPR015425 -
Lan12g1240 1381 MobiDBLite consensus disorder prediction 499 553 - -
Lan12g1240 1381 Gene3D Formin, FH2 domain 995 1379 IPR042201 -
Lan12g1240 1381 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 189 IPR029021 -
Lan12g1240 1381 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1069 1380 - -
Lan12g1240 1381 MobiDBLite consensus disorder prediction 537 553 - -
Lan12g1240 1381 ProSiteProfiles Formin homology-2 (FH2) domain profile. 994 1381 IPR015425 -
Lan12g1240 1381 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lan12g1240 1381 MobiDBLite consensus disorder prediction 801 1001 - -
Lan12g1240 1381 PANTHER FORMIN-J 1 1376 - -
Lan12g1240 1381 MobiDBLite consensus disorder prediction 671 784 - -
Lan12g1240 1381 Coils Coil 1274 1294 - -
Lan12g1240 1381 MobiDBLite consensus disorder prediction 499 522 - -
Lan12g1240 1381 Gene3D - 204 336 - -
Lan12g1240 1381 MobiDBLite consensus disorder prediction 801 817 - -
Lan12g1240 1381 MobiDBLite consensus disorder prediction 822 969 - -
Lan12g1240 1381 MobiDBLite consensus disorder prediction 700 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1240 Lan-Chr12 18376001 18386510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1240 1 634 FH2 protein (formin) Gene Family AT5G07740 60.310 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1240 - - lang:109353635 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1240 12 18376001 18386510 Lan1g0297 1 2183988 2192610 LSH
Lan12g1240 12 18376001 18386510 Lan1g1047 1 20709155 20720957 LSH