Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1226 ATGGTGATTGAAAATTCAAGTAAAGGCTATCAAGCCAAGAAAGAGGGTGATAGTACTAATATTGAGAAGTTGTCAATGGCACCTTATACTACTTCAACTTCTTCAAAACAATGGGCAGCATTCAGAAATCCAAGAATAGTGAGAGTGTCACGTGCTTTGGGAGGAAAAGATAGGCATAGCAAAGTTTGCACCATAAGGGGGTTGAGGGACAGGAGGATTAGGCTTTCTATACCAACAGCAATTATCTTATATGATCTGCAACACAAACTTGGTCTTAACCAACCTAGCAAAGTCATAGATTGGTTGATTGAAGCCACAAAACTTGACATTGATAACCTCCCTCCACTTCAAATCCCTCATGGTTTCCCTCAATTTCATCACCAACAGACCATATTGCCTTATCATAATCATCATGAATCAAGTACTGCCTCTCATAATCACTTTGCTTCTGGAGGCTTCTATGATGCAAATATTTCCACTTTCATAAAAGGCAATGAGGAAAATCATCAAAAACTGCTGGGAAAGTCAAGGTATTGGGATTTAGATTCAGAACATTCAAGACTAAAGGGTAAAGAAGCTGAAAGTAGTGTAATGTTCAATATCTCACAAAAAGATGCAGTGTCATATAACTCCTACCATTCAGAGCCTTCCATTTTATCATTGTCCCAATTTGGAAGCCATGGATCTTTATTTCCTTCCCATGTTGATCCTCATCAAAACAGTGACAGTGGTGTGCAATTTTCATCCTCTAATTTGGCTGTACCATCTGGTTCTCAATTAATTTTTTGTCCACCTTCTGCTACAACATCACCTTTCACTCCACATGCTCCATTTATGGCCAACTCATCAGTGGAAAATGATCCAAGACAATTCAAACATGTTCAGATCTTGAGCTCATTAAGTAATAATTCACAAGTCATGCAGCCTCATCCTCTCATTCAGTCTCTTCATTCATTCTATTCACCTCTCAGCAGACGCCATCCAATAATGCCATTTAATTCCAAGCTTCTTGACTCAGATATCAACAAAAATTGTAGCCGACCAAATAAGGGAAGTGGTTCTCCTTCTTGA 1071 0.3875 MVIENSSKGYQAKKEGDSTNIEKLSMAPYTTSTSSKQWAAFRNPRIVRVSRALGGKDRHSKVCTIRGLRDRRIRLSIPTAIILYDLQHKLGLNQPSKVIDWLIEATKLDIDNLPPLQIPHGFPQFHHQQTILPYHNHHESSTASHNHFASGGFYDANISTFIKGNEENHQKLLGKSRYWDLDSEHSRLKGKEAESSVMFNISQKDAVSYNSYHSEPSILSLSQFGSHGSLFPSHVDPHQNSDSGVQFSSSNLAVPSGSQLIFCPPSATTSPFTPHAPFMANSSVENDPRQFKHVQILSSLSNNSQVMQPHPLIQSLHSFYSPLSRRHPIMPFNSKLLDSDINKNCSRPNKGSGSPS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1226 356 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 3 350 - -
Lan12g1226 356 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
Lan12g1226 356 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 350 IPR005333 GO:0003700
Lan12g1226 356 Pfam TCP family transcription factor 55 172 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1226 Lan-Chr12 18287244 18289244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1226 4 126 TCP Transcription Factor Family AT5G60970 61.538 9.39e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan12g1226 TCP 3.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1226 - - lang:109361996 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1226 12 18287244 18289244 Lan1g1065 1 20820661 20822751 LSH
Lan12g1226 12 18287244 18289244 Lan1g0131 1 964756 967015 LSH