Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1213 ATGGAGATTTCTGCAATGGCTTCCACCACTCCTTCTTCCACTCCCTCTCTCACACTCAACACTTTCTGCAAACCTCCTCAACTGAAACATTCCCATATCTCACTCCCAACCTCAACCACCATTTCACTTCTCACTCTCTTCTCACCTCCCTATGAAGCCAAAGCCTTCTCCAAGGATCAGATTCTCTCTTCCATAACCCAAGTGGAGAAAACGATCGATGAGGTTCAGGATGTGGGTTCCAGTTTTTTGGACACTTCACAACATGTTTTTGAAGCTATAGGGAATGCTTTGAAACCAGGCATCGAAACGGCGTTTCCGTTTGTGCAGCAGGCTGGGGAAGAGGCTTTTAAAGTTGCTTCACCGGTCATATCAGAGGTTATAAAGAAGGCACAAGAAGCACTCCAAAGTTCTGGTGTTGATGCTCAACCTGTTCTCAAGGCAGTGACAGATGCTGCAGAACAAACGACCAAGGTGATTGAAGGTGCCAAGCCAATAGCTTCAACAACTGTTGAGACCATATCTTCTTCAGATCCTACTGTGATTGCTGGAACGGCTGGAGCACTTTTTATTACATACCTTCTGTTTCCTCCAATCTGGTCTGCAATCTCCTTTAATTTCCGTGGTTACAAAGGCGAGCTTACCTCTGCTCAAACCCTTGATCTGATATCTACCCAAAACTACATTTTGATTGATATTAGGTCAGAGAAGGATAAGGACAAGACCGGCATCCCACGCCTTCCCTCTAGTGCTAAAAACAAGTTGATTGCCATTCCTTTGGAAGAACTGCCAAGTAAGCTGAAAGGAGTGGTGAGGAATGTGAAGAATGTGGAAGCTGAAATAGCAGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACTAATATTGTGATCTTGGACTCGTACTCGGACTTGGCTAAAATAGTTGCAAGAACACTAACCGGCCTCGGTTTTAAGAACAGCTGGATTGTTGCTGATGGGTTTTCTGGGGGCAGAGGGTGGATAAATAGTAGGTTAGGAACAGATTCATATAAATTTTCATTTGCAGAGGTGCTTTCACCATCCAGAGTCATTCCTGCTGCTGTTAGAAATTTTGGTACAACAAGCCAATCTAGTAGGAAACTTCTGCCTGGGTCTGACTGA 1146 0.4415 MEISAMASTTPSSTPSLTLNTFCKPPQLKHSHISLPTSTTISLLTLFSPPYEAKAFSKDQILSSITQVEKTIDEVQDVGSSFLDTSQHVFEAIGNALKPGIETAFPFVQQAGEEAFKVASPVISEVIKKAQEALQSSGVDAQPVLKAVTDAAEQTTKVIEGAKPIASTTVETISSSDPTVIAGTAGALFITYLLFPPIWSAISFNFRGYKGELTSAQTLDLISTQNYILIDIRSEKDKDKTGIPRLPSSAKNKLIAIPLEELPSKLKGVVRNVKNVEAEIAALKISYLKKINKGTNIVILDSYSDLAKIVARTLTGLGFKNSWIVADGFSGGRGWINSRLGTDSYKFSFAEVLSPSRVIPAAVRNFGTTSQSSRKLLPGSD* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1213 381 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 189 331 IPR036873 -
Lan12g1213 381 Coils Coil 266 286 - -
Lan12g1213 381 ProSiteProfiles Rhodanese domain profile. 223 344 IPR001763 -
Lan12g1213 381 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 5 380 - -
Lan12g1213 381 Gene3D - 211 349 IPR036873 -
Lan12g1213 381 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 5 380 IPR044690 GO:0009704|GO:0071277|GO:0090333
Lan12g1213 381 CDD RHOD 217 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1213 Lan-Chr12 18190909 18193585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1213 9 302 Sulfurtransferasese or Rhodanese AT5G23060 65.116 1.60e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1213 - - adu:107469155 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1213 12 18190909 18193585 Lan1g0161 1 1175362 1178285 LSH