Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1211 ATGGAGCCCATGGACATCGTTGGCAAATCGAAGGAAGATGCGTCGCTTCCTAAAGCTACAATGACAAAAATCATTAAAGAGATGTTGCCCCCGGATGTACGTGTTGCAAGAGATGCCCAGGATCTACTGATCGAGTGTTGTGTAGAGTTTATAAATCTCGTCTCATCCGAGTCCAATGAAGTCTGTAACAGAGAGGAAAAACGGACGATAGCACCTGAGCATGTATTGAAGGCTTTGCAGGTACTTGGATTTAGTGAGTACATTGAAGAAGTATATGCAGCGTACGAGCAGCACAAGCTGGAGACTATGGATACTTTAAAAGCTGGCAAGTGGAGCAATGGAGCTGAGATGACCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGGATGAACGGTGGGGCAGTTGCTCCCAAACAGCCAGATGGTGACCAAAGTTTAGATAGCTAA 468 0.4637 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREEKRTIAPEHVLKALQVLGFSEYIEEVYAAYEQHKLETMDTLKAGKWSNGAEMTEEEALAEQQRMFAEARARMNGGAVAPKQPDGDQSLDS* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1211 155 Gene3D Histone, subunit A 4 141 IPR009072 GO:0046982
Lan12g1211 155 MobiDBLite consensus disorder prediction 136 155 - -
Lan12g1211 155 PANTHER PROTEIN DR1 HOMOLOG 1 154 IPR044255 -
Lan12g1211 155 SUPERFAMILY Histone-fold 12 141 IPR009072 GO:0046982
Lan12g1211 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1211 Lan-Chr12 18178767 18181889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1211 1 151 CCAAT-DR1 Transcription Factor Family AT5G23090 84.416 7.68e-93 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lan12g1211 CBFD_NFYB_HMF 3.4e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1211 K21751 - qsu:111987282 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1211 12 18178767 18181889 Lan1g0168 1 1207655 1210974 LSH