Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1201 ATGTATTCCTCAAATAGACCCATCAAAGGCAATGACCTAATCCCCTACCCTATCCAATTTTGCTCCTCTAGGCCTTTTGCCATTGAAAGCAACCCAACCTCAACACAAGAAACAACCACTTCTGCCTTTCCTTCTCCTCCTTTGTCCTTTTTTCAATTCCCTTATGATCCTTTTGAAGACCATGAAATTTTGCTTGAACAACAACATCATCATGAGTTACTTAATCACCAACAATCTCTAGCTGATGATGAGTCTATTAATGTTAACATGGAGAATAATAGTATTATCCCTGATCATAAAGCAAGACAAGGTACGGATCCGCAGATCCAAATAAGAAGATCTAGCAAGAAAGATCGACATAGTAAGATCAATACAGCTAAAGGAATGAGAGATCGAAGAGTGAGATTGTCTATTTTAGTTGCAAAAAGGTTTTTCGGTCTACAAGACATGTTAGGCTTTGACAAAGCCAGCAAAACTGTGGACTGGTTGTTGAACCAAGCAAAAATTGAGATCGAGCAACTAGCAAGGGAGAAGAATATTCATCATCATGATGATGTCAAGAGTGCATCTTCAACTTCGGAATGTACTGACGTTGTGTCAAGCTTGGATGAGGTTGTTGTTATTGGAAATCGGGAACAAGTTAAGGGAGTAATAAAGGTAAGAAGAGCTAAGCTTTGTAGAAAGAGTGAATTCAAGTATGTTTGTAAGGAATCAAGGGAAAAGGCGAGAGAAAGAGCAAGAGAAAGGACCAAAGAAAAGATAAAGACTCGCGATCTGATGCTAGCTGAAGCTGATAAATCAAAGGAATGTGACGAAGCATCAAACAATAAGCTTAACGGTTTAGGTTCTTGGAATCCCTTTGAAACTGTAGAAGAATGTGCATATACTCAGATCCAAAGTGCTAATCCCTCCTTGGATGTGCTTACTCATGGGATCAAAGAACTGAGTTCTCAAGCAAAGGGGCATTTGGGAAGTGTAGAGGATATAGAGCATGAAGATTCTTTGGTGATTATGAGCAAATGGAACCCAACCATGATTTTCAATTATTCCTTGAGTAACTCAGGAATACTTCAAGAGCATCAATTCCCAGAATTTCAGTCCATTATGGGAAAACCATGGGAGTTGGGAGGCTTACAACAATGA 1143 0.392 MYSSNRPIKGNDLIPYPIQFCSSRPFAIESNPTSTQETTTSAFPSPPLSFFQFPYDPFEDHEILLEQQHHHELLNHQQSLADDESINVNMENNSIIPDHKARQGTDPQIQIRRSSKKDRHSKINTAKGMRDRRVRLSILVAKRFFGLQDMLGFDKASKTVDWLLNQAKIEIEQLAREKNIHHHDDVKSASSTSECTDVVSSLDEVVVIGNREQVKGVIKVRRAKLCRKSEFKYVCKESREKARERARERTKEKIKTRDLMLAEADKSKECDEASNNKLNGLGSWNPFETVEECAYTQIQSANPSLDVLTHGIKELSSQAKGHLGSVEDIEHEDSLVIMSKWNPTMIFNYSLSNSGILQEHQFPEFQSIMGKPWELGGLQQ* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1201 380 PANTHER TRANSCRIPTION FACTOR TCP18 50 345 - -
Lan12g1201 380 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 50 345 IPR005333 GO:0003700
Lan12g1201 380 Pfam TCP family transcription factor 115 256 IPR017887 -
Lan12g1201 380 ProSiteProfiles TCP domain profile. 116 174 IPR017887 -
Lan12g1201 380 ProSiteProfiles R domain profile. 236 253 IPR017888 -
Lan12g1201 380 Coils Coil 164 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1201 Lan-Chr12 18137977 18139913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1201 47 250 TCP Transcription Factor Family AT3G18550 35.246 2.33e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan12g1201 TCP 8.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1201 - - lang:109345082 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1201 12 18137977 18139913 Lan1g1092 1 21041304 21043279 LSH
Lan12g1201 12 18137977 18139913 Lan1g0181 1 1277928 1279989 LSH