Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1192 ATGAAACAACCAAACACTCACCTAATGGCACTGATTATTTTCCTCCTCCTCCTTTCCCATCATCAACTCAGTTTCCGAGTCAACTCAGAGCCAACTCAGGATAAGCAAGCTCTCCTTGCTTTCATTTCTCAAACCCCACACGCTAACCGTCTCAAATGGAACTCTTCTGAATCCACTTGTAACTGGGTTGGTGTACAATGTGATTCAACCAACTCCTCCGTCTATTCACTCCGTTTACCCGGCGTTGGTCTCGTTGGTCAGATCCCACCCAACACCATTGGCCGTCTCATTCAGCTTCGTATTCTCAGTCTCCGCTCTAACGGTCTCACTGGTCAGATCCCCTCTGATTTTTCCAATCTCATTTTCCTTCGCAGTCTCTATCTTCAAAATAATGTCTTCTCCGACGAGTTCCCACCGAGTCTTACTCGACTCACTCGTTTAACTCGCTTGGATCTCTCTTCCAATAACTTCTCTGGCACGATCCCTTTCGCTATCAACAACTTAACTCACCTCACTGGTCTCTTCTTAGAGAATAACACCTTCTCTGGTAAACTTCCATCCATTACAACCAAATTAATCGACTTCGACGTTTCTAATAACCGCTTAAACGGTTCCATTCCGGAAACTCTTGCCAAATTCCCTTCGTCTTCTTTTGCTGGAAATTTAGATCTCTGTGGTGGTCCGTTAAAGCCATGCAACTCGTTTTTTCCGGCACCGGCGCCGTCACCTGAGGCTACAGTTCCGTCGAACGCGGTCCATAAAAAGTCTAAGAAGAAGAAGCTTTCAACCGGTGCCATTATCGGAATTGTCGTAGGGTGTGTAGCGGGTGCGTTGTTACTACTCCTGCTTCTGTTGTTTTGTTTACGTAAGCGGCAGCGCGGGCAACCACCTAAGCAGCCAAAGCCAGTGTCAACGGCGGCTCGTAGTGTACCTACGGCGGAAGCAGGAACGTCGTCGTCAAAGGACGATATAACAGGTGGTTCAGCGGAGACAGAGAGGAACAAGCTGGTGTTTTTGGAAGGAGGAATATATAGCTTCGATTTGGAGGATCTGCTTCGTGCTTCGGCGGAGGTATTAGGGAAAGGGAGCGTGGGGACTTCGTATAAGGCGTTGTTGGAAGAAGGAACGACGGTGGTGGTGAAGCGGTTAAAGGATGTGGTTGTTACTAAGAAAGAGTTTGAGATGCAAATGGAAATGTTGGGAAAGATTAAACACGAGAATGTGGTTCCTCTTAGAGCTTTCTACTTCTCCAAAGATGAGAAATTGCTTGTTTATGATTACATCACTGCTGGTAGCTTGTCTGCACTTCTTCACGGGAGCCGAGGGTCTGGGCGAACACCTCTAGATTGGGATAGCAGAATGAAAATAGCACTAGGAGCCGCAAGAGGGCTTGCATGCCTCCACATCTCAGGCAAGGTGGTTCACGGCAACATCAAATCTTCAAATATACTCCTCCGAGGACCCGACAACGACGCAAGCGTTTCAGACTTTGGCCTCAACCCATTGTTTGGTAACGGAGCCCCATCCAACCGCGTTGCAGGTTATCGAGCCCCGGAGGTTTTAGAGACCCGTAAGGTAACCTTCAAGTCTGACGTGTACAGCTATGGAGTGTTGCTATTAGAATTATTAACTGGGAAGGCACCCAACCAAGCTTCACTGGGTGAAGATGGCATTGACCTCCCCAGGTGGGTCCAGTCAGTGGTTCGTGAAGAGTGGACTGCTGAGGTGTTCGACGCTGAGCTCATGAGGTTCCACAACATAGAAGAGGAAATGGTTCAGCTGTTGCAGATTGCAATGGCTTGTGTTTCGGTGGTGCCTGATCAGAGGCCAAGCATGCAGGAAGTGGTGCGCATGATTGAGGACATGAATAGGGGAGAGACAGATGATGGTTTAAGACAGTCCTCTGATGATCCTTCTAAAGGATCTGAAGGTCACACCCCACCCCCTGAGTCAAGGACACCACCTAGGTCCACACCTTAA 1980 0.4848 MKQPNTHLMALIIFLLLLSHHQLSFRVNSEPTQDKQALLAFISQTPHANRLKWNSSESTCNWVGVQCDSTNSSVYSLRLPGVGLVGQIPPNTIGRLIQLRILSLRSNGLTGQIPSDFSNLIFLRSLYLQNNVFSDEFPPSLTRLTRLTRLDLSSNNFSGTIPFAINNLTHLTGLFLENNTFSGKLPSITTKLIDFDVSNNRLNGSIPETLAKFPSSSFAGNLDLCGGPLKPCNSFFPAPAPSPEATVPSNAVHKKSKKKKLSTGAIIGIVVGCVAGALLLLLLLLFCLRKRQRGQPPKQPKPVSTAARSVPTAEAGTSSSKDDITGGSAETERNKLVFLEGGIYSFDLEDLLRASAEVLGKGSVGTSYKALLEEGTTVVVKRLKDVVVTKKEFEMQMEMLGKIKHENVVPLRAFYFSKDEKLLVYDYITAGSLSALLHGSRGSGRTPLDWDSRMKIALGAARGLACLHISGKVVHGNIKSSNILLRGPDNDASVSDFGLNPLFGNGAPSNRVAGYRAPEVLETRKVTFKSDVYSYGVLLLELLTGKAPNQASLGEDGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPSMQEVVRMIEDMNRGETDDGLRQSSDDPSKGSEGHTPPPESRTPPRSTP* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1192 659 MobiDBLite consensus disorder prediction 620 659 - -
Lan12g1192 659 PANTHER OS05G0588300 PROTEIN 21 640 - -
Lan12g1192 659 MobiDBLite consensus disorder prediction 620 639 - -
Lan12g1192 659 CDD STKc_IRAK 359 622 - -
Lan12g1192 659 SUPERFAMILY L domain-like 33 215 - -
Lan12g1192 659 Pfam Protein kinase domain 356 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1192 659 MobiDBLite consensus disorder prediction 293 327 - -
Lan12g1192 659 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Lan12g1192 659 Gene3D Phosphorylase Kinase; domain 1 321 427 - -
Lan12g1192 659 PANTHER OS05G0480400 PROTEIN 21 640 - -
Lan12g1192 659 Gene3D Transferase(Phosphotransferase) domain 1 428 640 - -
Lan12g1192 659 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Lan12g1192 659 SUPERFAMILY Protein kinase-like (PK-like) 357 619 IPR011009 -
Lan12g1192 659 ProSiteProfiles Protein kinase domain profile. 353 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1192 659 Gene3D Ribonuclease Inhibitor 191 232 IPR032675 -
Lan12g1192 659 MobiDBLite consensus disorder prediction 310 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1192 Lan-Chr12 18067409 18070835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1192 34 640 Receptor kinase-like Gene Family AT5G58300 55.537 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan12g1192 Pkinase 5.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1192 - - gmx:100806857 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1192 12 18067409 18070835 Lan1g1101 1 21123979 21126891 LSH
Lan12g1192 12 18067409 18070835 Lan1g0193 1 1392447 1396216 LSH