Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1188 ATGGTGTTACCTGTATCCATGTCTGGCGACACAGAGCTAGAAAATCTGTCAAGGGATGATAGCCATAGCCATAGCCATAGCCATAGCCATAACCATAGCCATTACAGTATCTCCACTTGTATTTTACCTGCTCTTGGTGCCAGAACCAGCTGCAGAGTCAAGCTCAGACCGTTCATTATTTCCCCTTATCACCACCATTACAGGGTATGGCAAAGTTTCCTTACTGTTCTAGTGATCTACACAGCTTGGGTATCTCCATTTGAATTTGGATTCCTTAAGAAACCCAAAGCACCACTATCCATTACTGATAATGTTGTTAATGGTTTCTTTGCCATGGATATATTTCTCACCTTCTTTGTGGCTTTCATTAACAAATCAACCTATTTGTTAGTTGATGATCAGAAACAGATTGCTTGGAAATATACAAGAACTTGGTTGGCCTTTGATGTTATCTCTACCGTTCCTTCAGAGCTTATTCAAAAGATATCACCTAAACCTCTCCAATCCTATGGCTTATTTAATATGCTTCGCCTTTGGCGTCTTCGAAGAGTTAGTGATTTCTTTTCTCGGATGGAGAAGGACAGAAACTATAACTATTTCCATGTTAGGTGTGTTAAGCTTATCTGTATTACCCTTTTTGCTGTTCATTGTGCTGCCTGCTTTTATTATCTTGTTGCTGCACGCTATCATGATCCTAAAAGGACATGGATTGGGGCAACAATGGACAATTTTCTTGAGCAGAGTTTGTGGACCAGATATGTGACATCCATGTACTGGTCTATAACTACTTTAACGACTGTTGGCTATGGAGATTTGCATCCGGTGAACTCGAGCGAAATGATATTTGACATCTTTTACATGCTCTTCAATTTGGGATTAACAGCATATCTTATTGGTAATATGACTAACTTAGTTGTCCATGGCACAAGTAGAACCAGAAAATTTAGAGATGCTATACAAGCTGCATCAAGTTTTGCTCAAAGAAATCAATTGCCGGCTCGTTTGCAAGACCAGATGCTTGCACATTTGTGTTTGAAGTTTAGAACAGACTCAGAGGGGTTGCAGCAGCAAGAGTCCCTTGATTGTCTTCCTAAAGCCATCAGATCAAGCATTTCACATTATCTTTTTTATTCATTGGTGGATAAGGTCTACTTGTTTCGCGGGGTTTCAAATGACTTGTTGTTTCAATTGGTCTCAGAGATGAAAGCCGAGTATTTTCCTCCCAAAGAAGATGTCATCTTGCAGAATGAAGCACCCACTGATTTTTATATACTAGTAACTGGAGCTGTGGATTTGGTGGTTCTTAAGAATGGTGTTGAACATGTTGTTGGAGAGGCCAAAACAGGTGATCTTTGTGGTGAAATTGGTGTACTTTGCTATAAGCCACAACACTTCACTGTCAGAACGAAGCGATTAAGCCAGCTGCTCAGGTTGAACCGTACTACATTCTTGAATATTATTAAGGCTAATGTAGGAGACGGAACCATAATCATGAATAATCTGCTTCAGTGTTTGAAAGAGCATAATGATCCAATCATGGATGATGTTTTGATGGAGACCGAGAACATGATAGCCGGTGGGAGGATGGACCTACCAGTGAGTCTTTGTTTTGCAGCAGTAAGAGGAGATGATTTCTTGCTATGTCAATTGTTGAAGCGGGGTTTGAATCCAAATGAACCCGATTACAATGGAAGGACAGCTTTGCATATAGCAGCATCTAAAGGAAATGAAAAATGTGTCTTGCTTCTGTTGGAATATGGTGCAGATCCCAACGTTAGAGATTCTGATGGTAATGTACCACTTTGGGAGGCTATAGTTGATGGACATGGATCAGTGAGCAATGTGCTAGTAGAAAATGGAGCAAATATGAAATATGGTGACATTGGTCAATTTGCATGCATTGCTGCTGAACAGAACAACCTCAACTTGCTCAAGGATATAATGCACTATGGAGGAGATATCACACTCCCTAATAATATCACAGGAACCACAGCTCTTCACGTTGCAGTCTCTGAAGACAACATAGAGATTGTCAAATTCCTTGTGGAACATGGAGCTGCCATTGATAAACCAGACATGCATGGTTGGACTCCAAGAGCTCTAGCAGACCAGCAGGGTCAAGATGATGTTAAAGCCATTTTTGAGTCCACTGGGGAGCCTAAACATCAACCTTTTGTTGCCATTCCTCAGAACCAAGCTAAGGTCAGGTACCTTGGGAGATTTCCAAGTGAGCCAACGATGGCTTTGTGCCATGATGCCTCATTTCTTTCACCCGATGGTTCTAGGAGCCAAAGCCGTCCGAGGCGTAGGAGCAATATCTTCAATAAGTCACTCTTTGGGATAATGTCAACAGCACACAAAGGGGAAAAGAACTTTTTTTTACCTGCTAACATTGATAATGCTGCAAAGAATGGTATGAAAAGTAGAGTTAGTACAATTAGAGTAACAATTAGTTGCCCTGAGAAGGGTGAGGTTGTTGGGAAGCTTGTGTTACTACCTAGAAGCTTTAAGGAGCTACTTGAGATTGGAGCTAGGAAATTTGGTGTCTTTCCTCCTGTTAAGGTTATCTGCAAAGATGGAACTGAGATTGAAGATATAGAGGTTATCAGAGATGGTGACCATCTTATTTTTGTCAGTGCTGATGATGAGATTGAATAA 2658 0.4086 MVLPVSMSGDTELENLSRDDSHSHSHSHSHNHSHYSISTCILPALGARTSCRVKLRPFIISPYHHHYRVWQSFLTVLVIYTAWVSPFEFGFLKKPKAPLSITDNVVNGFFAMDIFLTFFVAFINKSTYLLVDDQKQIAWKYTRTWLAFDVISTVPSELIQKISPKPLQSYGLFNMLRLWRLRRVSDFFSRMEKDRNYNYFHVRCVKLICITLFAVHCAACFYYLVAARYHDPKRTWIGATMDNFLEQSLWTRYVTSMYWSITTLTTVGYGDLHPVNSSEMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDAIQAASSFAQRNQLPARLQDQMLAHLCLKFRTDSEGLQQQESLDCLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLKNGVEHVVGEAKTGDLCGEIGVLCYKPQHFTVRTKRLSQLLRLNRTTFLNIIKANVGDGTIIMNNLLQCLKEHNDPIMDDVLMETENMIAGGRMDLPVSLCFAAVRGDDFLLCQLLKRGLNPNEPDYNGRTALHIAASKGNEKCVLLLLEYGADPNVRDSDGNVPLWEAIVDGHGSVSNVLVENGANMKYGDIGQFACIAAEQNNLNLLKDIMHYGGDITLPNNITGTTALHVAVSEDNIEIVKFLVEHGAAIDKPDMHGWTPRALADQQGQDDVKAIFESTGEPKHQPFVAIPQNQAKVRYLGRFPSEPTMALCHDASFLSPDGSRSQSRPRRRSNIFNKSLFGIMSTAHKGEKNFFLPANIDNAAKNGMKSRVSTIRVTISCPEKGEVVGKLVLLPRSFKELLEIGARKFGVFPPVKVICKDGTEIEDIEVIRDGDHLIFVSADDEIE* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1188 885 PANTHER K+ TRANSPORTER 1-RELATED 22 881 - -
Lan12g1188 885 Pfam Ion transport protein 68 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan12g1188 885 ProSiteProfiles KHA domain profile. 814 885 IPR021789 -
Lan12g1188 885 SUPERFAMILY Voltage-gated potassium channels 62 306 - -
Lan12g1188 885 PANTHER POTASSIUM CHANNEL AKT1 22 881 IPR045319 GO:0005249|GO:0006813
Lan12g1188 885 MobiDBLite consensus disorder prediction 1 33 - -
Lan12g1188 885 CDD CAP_ED 385 490 IPR000595 -
Lan12g1188 885 Gene3D - 69 306 - -
Lan12g1188 885 Pfam Ankyrin repeats (3 copies) 536 624 IPR002110 GO:0005515
Lan12g1188 885 Pfam Ankyrin repeats (3 copies) 634 716 IPR002110 GO:0005515
Lan12g1188 885 SMART ANK_2a 661 690 IPR002110 GO:0005515
Lan12g1188 885 SMART ANK_2a 627 656 IPR002110 GO:0005515
Lan12g1188 885 SMART ANK_2a 563 592 IPR002110 GO:0005515
Lan12g1188 885 SMART ANK_2a 530 559 IPR002110 GO:0005515
Lan12g1188 885 SMART ANK_2a 596 625 IPR002110 GO:0005515
Lan12g1188 885 ProSiteProfiles Ankyrin repeat region circular profile. 661 692 - -
Lan12g1188 885 SUPERFAMILY cAMP-binding domain-like 310 504 IPR018490 -
Lan12g1188 885 Pfam Cyclic nucleotide-binding domain 405 489 IPR000595 -
Lan12g1188 885 ProSiteProfiles Ankyrin repeat region circular profile. 596 627 - -
Lan12g1188 885 Gene3D Jelly Rolls 349 510 IPR014710 -
Lan12g1188 885 Gene3D - 531 715 IPR036770 -
Lan12g1188 885 PRINTS Ankyrin repeat signature 564 579 IPR002110 GO:0005515
Lan12g1188 885 PRINTS Ankyrin repeat signature 677 691 IPR002110 GO:0005515
Lan12g1188 885 SMART cnmp_10 385 502 IPR000595 -
Lan12g1188 885 SUPERFAMILY Ankyrin repeat 534 717 IPR036770 -
Lan12g1188 885 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Lan12g1188 885 ProSiteProfiles cAMP/cGMP binding motif profile. 385 487 IPR000595 -
Lan12g1188 885 ProSiteProfiles Ankyrin repeat region circular profile. 563 594 - -
Lan12g1188 885 ProSiteProfiles Ankyrin repeat profile. 661 693 IPR002110 GO:0005515
Lan12g1188 885 PRINTS EAG/ELK/ERG potassium channel family signature 80 87 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan12g1188 885 PRINTS EAG/ELK/ERG potassium channel family signature 103 113 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan12g1188 885 PRINTS EAG/ELK/ERG potassium channel family signature 114 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan12g1188 885 PRINTS EAG/ELK/ERG potassium channel family signature 253 270 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan12g1188 885 PRINTS EAG/ELK/ERG potassium channel family signature 279 290 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan12g1188 885 PRINTS EAG/ELK/ERG potassium channel family signature 297 306 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan12g1188 885 ProSiteProfiles Ankyrin repeat profile. 563 595 IPR002110 GO:0005515
Lan12g1188 885 Pfam KHA, dimerisation domain of potassium ion channel 814 877 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1188 Lan-Chr12 18041500 18046654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1188 17 877 Ion Channels AT2G25600 60.809 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1188 K21867 - gmx:100819491 1373.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1188 12 18041500 18046654 Lan1g0202 1 1466549 1471997 LSH