Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1184 ATGGACACCGCCGTATATGAACGTGAAGTCGACTACGACAGCAGCTCCTCCTCCATCACCGTCCCTGAAACAAGGCGGAGCTGGATGAGTAACCTCAGCTTCACCAGCCACCGCCGCCGGAGCTCTGTCTCCGTTTGTTCCTCCACGACATATACCACCACTACTTCCACCAAGCCACATAAGGCAAACCAAGTTGCATGGGAGGCCATGCAGCGGCTCCGCCTCGACAAAGGTCACCTTGGATTGGACAACTTCCGGCTGCTGCGGCGGCTGGGAAGTGGTGACATAGGGAACGTGTACCTTTGCAAAATAAGGAACCCTATGGTGGGTTTGGCACAGTGCTTGTATGCTATGAAAGTGGTGGATAGAGAAGCACTTGCTATAAGGAACAAGTTGCATAGAGCTGAAATGGAGAAAGAGATTTTAGGGATGCTTGATCACCCTTTCTTGCCTACTTTGTACACTCAGTTCGATGCTTCTCATTATTCTTGCTTCCTTATGGAGTTCTGTCCCGGTGGAGACTTATATGCTGCTCGCCACCGCCAACCTGGGAACCGCTTTTCCATTGCCTCCGCTAAATTTTATGCAGCTGAGACACTTTTGGCCTTAGAGTATCTGCACATGATGGGCATAGTGTACAGGGATTTGAAGCCAGAGAATGTGCTGGTAAGGGAGGATGGGCACATTATGCTTTCAGATTTTGATCTTTCTCTCAAATGTGACGTTGTTCCAAAGCTACTAAGGAGCAAAACAAGGTCAGAGGGAACTATTAAGAGCATTAAGAGATCTACACCTTCCTGCACAGCACCCATGCAGCCTGTGATATCATGTCTTTTAGGCAACAAAACAAGACCAACTGTGACAAGAGTTATTAGAGAAAATGTTACTATTGAAGACCAAGAACTTGAATCAGAGCTGGTGGCTGAGCCTATTGATGCAAGGTCCAAGTCATTTGTAGGGACACATGAGTACTTGGCACCAGAAGTGATTTTGGGACAAGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTGTTCTTGTATGAAATGTTATATGGAAGAACACCTTTCAAAGGTGACAATAATGAGAAAACTCTTATTAACATTTTAAAGCAACCATTGGCATTTCCTAAAATATCATTCAGAAGCAGCAAGGAGTATCAAGAAATAGAGAAAGTTCAAGACCTTATAAGCAAGCTGTTAGTGAAGAATCCAAATAAGAGAAGTGGAAGTTACATGGGATCTGTTGAGATTAAAAGGCATGAGTTCTTCAAGGGTGTTAATTGGGCTTTGATTAGATCAGTTAAACCCCCTGAGGTCCCTAATGATAATAAGAACAGGATTAGAAGTAGGGTTTTAGTACCAAAACTAAGCAAGCTAGACAAAGATCAACCATATCAGCTTAATCCTAATTTTGAATACTTCTAA 1431 0.4416 MDTAVYEREVDYDSSSSSITVPETRRSWMSNLSFTSHRRRSSVSVCSSTTYTTTTSTKPHKANQVAWEAMQRLRLDKGHLGLDNFRLLRRLGSGDIGNVYLCKIRNPMVGLAQCLYAMKVVDREALAIRNKLHRAEMEKEILGMLDHPFLPTLYTQFDASHYSCFLMEFCPGGDLYAARHRQPGNRFSIASAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRSEGTIKSIKRSTPSCTAPMQPVISCLLGNKTRPTVTRVIRENVTIEDQELESELVAEPIDARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGDNNEKTLINILKQPLAFPKISFRSSKEYQEIEKVQDLISKLLVKNPNKRSGSYMGSVEIKRHEFFKGVNWALIRSVKPPEVPNDNKNRIRSRVLVPKLSKLDKDQPYQLNPNFEYF* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1184 476 PANTHER PROTEIN KINASE PINOID 2 6 476 - -
Lan12g1184 476 Gene3D Transferase(Phosphotransferase) domain 1 312 443 - -
Lan12g1184 476 SMART serkin_6 85 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1184 476 SUPERFAMILY Protein kinase-like (PK-like) 64 444 IPR011009 -
Lan12g1184 476 ProSiteProfiles Protein kinase domain profile. 85 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1184 476 CDD STKc_phototropin_like 83 442 - -
Lan12g1184 476 Gene3D Phosphorylase Kinase; domain 1 83 169 - -
Lan12g1184 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Lan12g1184 476 Gene3D Transferase(Phosphotransferase) domain 1 170 239 - -
Lan12g1184 476 Pfam Protein kinase domain 315 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1184 476 Pfam Protein kinase domain 86 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1184 476 PANTHER FLIPPASE KINASE 1-RELATED 6 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1184 Lan-Chr12 18019029 18020946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1184 2 476 AGC Kinase Gene Family AT2G26700 55.977 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan12g1184 Pkinase 6.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1184 K08286 - gmx:100777988 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1184 12 18019029 18020946 Lan1g1109 1 21185856 21188016 LSH