Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1179 ATGGCTGGTATTGCTTTGTTGAAGAAGTTTTCAAGAACCACTCCGATCGCATTCTCCAATACCTTTGGTGGTGGTGGTGGTGGTGGTGGCCAATCCAACACACACTCTTCCACTTTCCGCCTTCCCTTTACTGCTCTCACCACCATCTCCGGCGGACTCTCCTCCTTCTATTACTTTTCCTCTCCCAACCTCGTTCATTCAGAAAAAGTACAGGAAGGGGGAAGTAAAAACATTGCTCTAGTCCCAGACAAATGGATCGAATTTAAGTTGCAAGACACTGCCAGAGTTAGTCACAATACCCAATTATTCAGGTTTTCATTTGATCCAACTAAGAAGTTGGGTTTGGATATAGCTTCTTGCATTGTTACAAGGGCTCCATTGGGACAAAATGCTGAAGGAAAACCAAAATATGTCATACGCCCGTATACTCCAATATCTGATCCAGAATCCAAGGGATATTTTGATTTGTTAATCAAGGTGTATCCTGAAGGGAAAATGAGCCAGCATTTTGCAAGCTTAAAACCTGGTGATGTTGTTGAAGTTAAAGGGCCCGTTGAAAAGCTCAGATATACTCCTAATATGAAGAAGCACATTGGCATGATTGCTGGTGGTACGGGAATTACTCCAATGCTTCAGGTAATTGAGGCTGTATTGAAGAATCCTGATGACAAAACTCAGATATCTCTGCTTTATGCTAATGTCTCCCCAGATGACATATTGCTTAAGCAGAAGCTTGACGTTCTTGCAGCAAGCCACCCAAACTTAAAGGTATTCTACACTGTTGATAATCCAACAAAAAATTGGAGAGGAGGTGCAGGTTACATATCAAAGGATGTAGTTGTGAAAGGCTTACCCAGTCCTAGTGATGATACTCTAATACTTGTATGTGGCCCCCCTGGGATGATGAAACATGTATCTGGTGAAAAGGCCAAAGATTGGACACAGGGAGAGATTTCTGGCATACTCAAAGAGGCTGGATACACTGAAGAAATGGTTTACAAGTTTTGA 1008 0.4236 MAGIALLKKFSRTTPIAFSNTFGGGGGGGGQSNTHSSTFRLPFTALTTISGGLSSFYYFSSPNLVHSEKVQEGGSKNIALVPDKWIEFKLQDTARVSHNTQLFRFSFDPTKKLGLDIASCIVTRAPLGQNAEGKPKYVIRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPVEKLRYTPNMKKHIGMIAGGTGITPMLQVIEAVLKNPDDKTQISLLYANVSPDDILLKQKLDVLAASHPNLKVFYTVDNPTKNWRGGAGYISKDVVVKGLPSPSDDTLILVCGPPGMMKHVSGEKAKDWTQGEISGILKEAGYTEEMVYKF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1179 335 SUPERFAMILY Riboflavin synthase domain-like 79 193 IPR017938 -
Lan12g1179 335 Gene3D - 182 335 IPR039261 -
Lan12g1179 335 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 83 191 IPR017927 GO:0016491
Lan12g1179 335 CDD cyt_b5_reduct_like 88 335 - -
Lan12g1179 335 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 140 147 IPR001709 GO:0016491
Lan12g1179 335 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 199 218 IPR001709 GO:0016491
Lan12g1179 335 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 237 248 IPR001709 GO:0016491
Lan12g1179 335 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 292 300 IPR001709 GO:0016491
Lan12g1179 335 Pfam Oxidoreductase FAD-binding domain 88 190 IPR008333 -
Lan12g1179 335 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 177 333 IPR039261 -
Lan12g1179 335 Gene3D Translation factors 78 181 - -
Lan12g1179 335 PANTHER NADH-CYTOCHROME B5 REDUCTASE 51 335 IPR001834 GO:0016491
Lan12g1179 335 Pfam Oxidoreductase NAD-binding domain 200 306 IPR001433 GO:0016491
Lan12g1179 335 PRINTS Cytochrome B5 reductase signature 140 147 - -
Lan12g1179 335 PRINTS Cytochrome B5 reductase signature 176 190 - -
Lan12g1179 335 PRINTS Cytochrome B5 reductase signature 199 218 - -
Lan12g1179 335 PRINTS Cytochrome B5 reductase signature 237 248 - -
Lan12g1179 335 PRINTS Cytochrome B5 reductase signature 292 300 - -
Lan12g1179 335 PANTHER NADH-CYTOCHROME B5 REDUCTASE-LIKE 51 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1179 Lan-Chr12 17992576 17998118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1179 76 335 NADPH P450 reductases AT5G17770 40.458 2.54e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1179 K00326 - gmx:100781191 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1179 12 17992576 17998118 Lan1g1112 1 21201731 21206923 LSH