Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1164 ATGGTTTCTTCCATACTACCTATTATGTTCTTGTTGTCCTTAATGCTTCTTACTAATGAAGCCACTGCAGAAAAAAACCAGTCTAACATCATTGAGTTGGGTTCATGGCTATCTCCCAGTGGTAACCATACTTCATGGGTATCTAATTCTGGCCATTTTGGTTTTGGTTTTTACCATCAAGGTAATGGCTTTGCTGTTGGAATATGGCTGATTGATGACAACACTGTTGTCTGGACTGCTAACCGTGATAGTCCACCACTCTCCTTTAATTCCAAATTGATCTTTTCGAATAATGGTAGGCTGCTTCTACAAAAAGAGGAGGGACATGCAGAAGATCTTGTTCCTGATGTTATTACTGAGTCTGCTGCTTCGGCTTCCATGCTCGATTCTGGTAACTTTGTGCTGTATGATAAAAATTATAGTGTTATCTGGCAAAGCTTTGATAACCCAACTGACACCATATTAGGAGGTCAGAATTTAACAGAAGGAAACAAACTAGTCTCTAGCATGTCTGAATCAGACCATTCGAGTGGACATTTCTTTCTCAACATGCAGAGTGATGGTAACCTTGTTGCTTACCCTGTCAACAGCTCAGCTGGACCTCATGATGCTTACTGGGCTTATTATTATTATTATTATCCCAGAAAACTCAGCGTTGATCCTCAAGGCTTTCTTTGTAGAAATAACTTTCAATGTTTGAGTAATAGCACTAGCCTTAGCTCCAACTCAAACAATACTACGCCTCCAATCTACCGTGCAACACTTGATGTTGATGGGAACTTCAGATTGTATGTGCACCAATTTGAGGGCAATACTAGCTCACGTGTACAAATGTTGTGGCAAGCCATCTCTGATGAATGTCAAATCAAAGGGTTTTGTGGTTTAAACAGTTATTGCTCCAACATAAGCGGTAAAGCTGCATGTCAGTGTTATCCTGGCTTTGTCCCCTCCAGTTCCAATAATGGTGGTAACAGCACCATGTTTCTGAACTGTAAAAGTAACCATAGCAAAAGTGATTGTCAAAGTAGTGAAGACCCTATGTTGTACAATATTACTTCCTTTGAAGATATGTCTTGGGGCGATTACCCATATTCAGTTATACCACTGAACTTAGAAGCTTGTCACAGGTCTTACCGAGAAGATTGTGATTGTGGAGCTGTGTTATATACAAGCGGAAACTGCAAAAAGTACAAGCTTCCGATTAGATATGGCAGAAGGTTACAAAATGCATCAGGCATAGCACTATTTAAGGTGCCTTCAGAAAATGTCATTAGTGCGTCATCTCAAAAGCAGCCTAAGCTCCTTGTTGATAACAAGAAACGCCTGATTATTGTTCTAGCCAGTAGTTTGGGCTCCGTTTTGTTGTTTTGTTTGGCCTTTGCAGTGTTTATTTTCTTCACTTACAGGCGTCAAGTTTGCAGGTATACATCGTTGTCCGAAAGTGCAAATCTCGGATTTACTGGGGAATGTTCTCTACGTTCATTTTCATTTGATGAACTTGTGCAATCAACTGGTAGCTTCATAGAAGAGATAGGCAGAGGATCTTTTGGAGCAGTTTATAAAGGTACAATAGGTGACAGTAACACAAGGATTGCCGTGAAGAGATTGGAGGTAATTGTGGATGAAGGGGAGAGAGAATTCCGAGCTGAAATCACTGCCATAGCTCGAACTCATCATAGGAATTTGGTTAAGCTTATTGGTTTTTGTATTGATGGGTCTAAAAAGCTTCTTGTTTATGAATATGCCAGCAATGGGTCTCTTGCAAATCTTCTCTTTAAATCTGAGAAGCACTTGTCTTCTAGAGACAGAATAAAAATTGCACTGGATGTGGCTAGAGGAATCCTGTATCTACATGAAGAGTGTGAAGTTCGTATTATCCATTGCAATATAAAGCCCCAAAACATACTTATGGATGAAGCTTGGACTGCAAAGATCTCCGAATTTGGATTAGCGAGGCTGTTGAAGCCTGGGCATTCCAGAACTAGACCAGGGGATGAGGTGAAAAGTGGGTACTTGGCACCAGAATTGCAGAAGAAAGAAGCATCAGTATCAGTAGAAGTTGACATTTACAGTTATGGTGTGGTGCTATTGGAGATCATCTGCCGCCGAAACAATATAGATGCAAATGCTTCTTCAGTGGAGGAGATACACCTTTCCAGTTGGGTATATCGATGCTTTGTTGCAGGGGAGTTAAATAAACTTGTTGCAGATGGAGGTGAAGATGTAGATTGGAGGATAATGGAAATAATGGTGAAGGTGGGGTTGTGGTGTGTCCATGATGACCCATCTCTTCGTCCTTCGATGAAGACTGTTATTTTGATGCTGGAAGGATTGAAAGATATTCCACTTCCCCCTTCTCCAGCATATTTGGCTGTATAA 2379 0.4073 MVSSILPIMFLLSLMLLTNEATAEKNQSNIIELGSWLSPSGNHTSWVSNSGHFGFGFYHQGNGFAVGIWLIDDNTVVWTANRDSPPLSFNSKLIFSNNGRLLLQKEEGHAEDLVPDVITESAASASMLDSGNFVLYDKNYSVIWQSFDNPTDTILGGQNLTEGNKLVSSMSESDHSSGHFFLNMQSDGNLVAYPVNSSAGPHDAYWAYYYYYYPRKLSVDPQGFLCRNNFQCLSNSTSLSSNSNNTTPPIYRATLDVDGNFRLYVHQFEGNTSSRVQMLWQAISDECQIKGFCGLNSYCSNISGKAACQCYPGFVPSSSNNGGNSTMFLNCKSNHSKSDCQSSEDPMLYNITSFEDMSWGDYPYSVIPLNLEACHRSYREDCDCGAVLYTSGNCKKYKLPIRYGRRLQNASGIALFKVPSENVISASSQKQPKLLVDNKKRLIIVLASSLGSVLLFCLAFAVFIFFTYRRQVCRYTSLSESANLGFTGECSLRSFSFDELVQSTGSFIEEIGRGSFGAVYKGTIGDSNTRIAVKRLEVIVDEGEREFRAEITAIARTHHRNLVKLIGFCIDGSKKLLVYEYASNGSLANLLFKSEKHLSSRDRIKIALDVARGILYLHEECEVRIIHCNIKPQNILMDEAWTAKISEFGLARLLKPGHSRTRPGDEVKSGYLAPELQKKEASVSVEVDIYSYGVVLLEIICRRNNIDANASSVEEIHLSSWVYRCFVAGELNKLVADGGEDVDWRIMEIMVKVGLWCVHDDPSLRPSMKTVILMLEGLKDIPLPPSPAYLAV* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1164 792 Gene3D - 25 148 IPR036426 -
Lan12g1164 792 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Lan12g1164 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 208 IPR036426 -
Lan12g1164 792 PIRSF SRK 1 792 IPR024171 GO:0004674
Lan12g1164 792 SUPERFAMILY EGF/Laminin 285 319 - -
Lan12g1164 792 Pfam Protein kinase domain 508 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1164 792 Gene3D Phosphorylase Kinase; domain 1 471 581 - -
Lan12g1164 792 Pfam D-mannose binding lectin 75 161 IPR001480 -
Lan12g1164 792 ProSitePatterns Protein kinases ATP-binding region signature. 511 534 IPR017441 GO:0005524
Lan12g1164 792 Gene3D Transferase(Phosphotransferase) domain 1 582 783 - -
Lan12g1164 792 SUPERFAMILY Protein kinase-like (PK-like) 491 776 IPR011009 -
Lan12g1164 792 Pfam S-locus glycoprotein domain 227 317 IPR000858 GO:0048544
Lan12g1164 792 ProSiteProfiles Protein kinase domain profile. 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1164 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 790 - -
Lan12g1164 792 SMART blect_4 37 150 IPR001480 -
Lan12g1164 792 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 8 790 - -
Lan12g1164 792 Gene3D - 151 284 IPR036426 -
Lan12g1164 792 CDD EGF_CA 285 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1164 Lan-Chr12 17925419 17928031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1164 492 787 Receptor kinase-like Gene Family AT5G38280 39.735 9.52e-62 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan12g1164 Pkinase 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1164 - - aip:107630435 928.702